I have the some problem in about 2 months.
My system is UbuntuStudio 8.04 and it is full upgraded. 
I didnt have the problem when I used kde applications on gnome (kaffeine, 
konqueror, k3b, Amarok etc. 
And I didnt have this problem when I created a new user at the same laptop or 
if I used sudo at the old user. 
I look  gconf at both users and it was ok. I look diff -ur ~user1/.gnome2/ 
~user2/.gnome/ and everything was ok! I check cat 
~user1/.config/gtk-2.0/gtkfilechooser.ini and for user2 but everything was ok 
also! 
I ckeck cat $HOME/.gtk-bookmarks but also everything was ok! 
So I killed trackerd and the problem fixed...

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gtk slow filechooser
https://bugs.launchpad.net/bugs/229539
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