I don't have php4-cli installed, but running php gave these warnings:
PHP Warning:  Module 'gd' already loaded in Unknown on line 0
PHP Warning:  Module 'ldap' already loaded in Unknown on line 0

After removing the extra extension=ldap.so and gd.so lines from
/etc/php5/cli/php.conf the errors went away.

-- 
/etc/cron.daily/rkhunter fails
https://bugs.launchpad.net/bugs/232129
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