As you are asking for IDE/SATA controllers. I have a 
SATA controller: ATI Technologies Inc SB600 Non-Raid-5 SATA .
I first experienced the problem when I enabled AHCI mode in BIOS.

I am running Intrepid AMD64

dmesg | grep ahci
[    2.480262] ahci 0000:00:12.0: version 3.0
[    2.480288] ahci 0000:00:12.0: PCI INT A -> GSI 22 (level, low) -> IRQ 22
[    2.480315] ahci 0000:00:12.0: controller can't do 64bit DMA, forcing 32bit
[    2.480415] ahci 0000:00:12.0: AHCI 0001.0100 32 slots 4 ports 3 Gbps 0xf 
impl SATA mode
[    2.480418] ahci 0000:00:12.0: flags: ncq sntf ilck led clo pmp pio

-- 
Heavy Disk I/O harms desktop responsiveness
https://bugs.launchpad.net/bugs/131094
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