Ok, so only periodically (15 minutes or more) which is the way the
program was designed.

Solutions:

1) Reboot when requested (or a soon as feasible)
2) Right-Click the notifier and exit it to disable Update Notifications for 
your current session (remember to reboot at some point)
3) Ignore the pop-up (I've fixed the code and new release 0.4 will move pop-up 
to bottom near systray rather than obtrusively at the top of screen)

-- 
Kubuntu Restart Notification Balloon Should not Repeatedly show up
https://bugs.launchpad.net/bugs/271419
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Bugs, which is subscribed to update-notifier-kde in ubuntu.

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