This happened to me yesterday on a 16.04 desktop system using update-
manager. Apparently failed during setup of package unattended-upgrades.

Below is apt/history.log, apt/term.log, ps and debconf version taken
while the GUI has been hanging (greyed out and unresponsive) for ~15
hours. GUI screenshot as shown in attachment.

$ tail -4 /var/log/apt/history.log
Start-Date: 2017-05-20  21:12:22
Commandline: aptdaemon role='role-commit-packages' sender=':1.438'
Upgrade: iproute:amd64 (1:4.3.0-1ubuntu3, 1:4.3.0-1ubuntu3.16.04.1), 
iproute2:amd64 (4.3.0-1ubuntu3, 4.3.0-1ubuntu3.16.04.1), 
unattended-upgrades:amd64 (0.90ubuntu0.5, 0.90ubuntu0.6), libjasper1:amd64 
(1.900.1-debian1-2.4ubuntu1, 1.900.1-debian1-2.4ubuntu1.1)
End-Date: 2017-05-20  21:12:29

$ tail -23 /var/log/apt/term.log
Log started: 2017-05-20  21:12:22
(Reading database ... 359114 files and directories currently installed.)
Preparing to unpack .../iproute2_4.3.0-1ubuntu3.16.04.1_amd64.deb ...
Unpacking iproute2 (4.3.0-1ubuntu3.16.04.1) over (4.3.0-1ubuntu3) ...
Preparing to unpack .../iproute_1%3a4.3.0-1ubuntu3.16.04.1_all.deb ...
Unpacking iproute (1:4.3.0-1ubuntu3.16.04.1) over (1:4.3.0-1ubuntu3) ...
Preparing to unpack .../libjasper1_1.900.1-debian1-2.4ubuntu1.1_amd64.deb ...
Unpacking libjasper1:amd64 (1.900.1-debian1-2.4ubuntu1.1) over 
(1.900.1-debian1-2.4ubuntu1) ...
Preparing to unpack .../unattended-upgrades_0.90ubuntu0.6_all.deb ...
Unpacking unattended-upgrades (0.90ubuntu0.6) over (0.90ubuntu0.5) ...
Processing triggers for man-db (2.7.5-1) ...
Processing triggers for libc-bin (2.23-0ubuntu7) ...
Processing triggers for systemd (229-4ubuntu17) ...
Processing triggers for ureadahead (0.100.0-19) ...
Setting up iproute2 (4.3.0-1ubuntu3.16.04.1) ...
Setting up iproute (1:4.3.0-1ubuntu3.16.04.1) ...
Setting up libjasper1:amd64 (1.900.1-debian1-2.4ubuntu1.1) ...
Setting up unattended-upgrades (0.90ubuntu0.6) ...
Use of uninitialized value $_[1] in join or string at 
/usr/share/perl5/Debconf/DbDriver/Stack.pm line 111, <GEN0> line 12.
Use of uninitialized value $val in substitution (s///) at 
/usr/share/perl5/Debconf/Format/822.pm line 83, <GEN7> line 11.
Use of uninitialized value $val in concatenation (.) or string at 
/usr/share/perl5/Debconf/Format/822.pm line 84, <GEN7> line 11.
Processing triggers for libc-bin (2.23-0ubuntu7) ...
Log ended: 2017-05-20  21:12:29

$ ps aux |grep update
miki      5027  0.0  1.2 730908 95960 ?        Sl   May20   0:20 
/usr/bin/python3 /usr/bin/update-manager
miki     10100  0.0  0.2 591036 22164 ?        Sl   May20   0:01 update-notifier

$ dpkg -l|grep debconf |head -1
ii  debconf                                                     1.5.58ubuntu1   
                                   all          Debian configuration management 
system

$ lsb_release -a
No LSB modules are available.
Distributor ID: Ubuntu
Description:    Ubuntu 16.04.2 LTS
Release:        16.04
Codename:       xenial


** Attachment added: "Hanging GUI of update-manager"
   
https://bugs.launchpad.net/ubuntu/+source/php7.0/+bug/1646739/+attachment/4880641/+files/Screenshot%20from%202017-05-21%2011-40-19.png

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You received this bug notification because you are a member of Ubuntu
Touch seeded packages, which is subscribed to debconf in Ubuntu.
https://bugs.launchpad.net/bugs/1646739

Title:
  "Use of uninitialized value" in debconf via update-manager

Status in debconf package in Ubuntu:
  Confirmed
Status in php7.0 package in Ubuntu:
  Confirmed
Status in samba package in Ubuntu:
  Confirmed
Status in update-manager package in Ubuntu:
  Confirmed

Bug description:
  During a software upgrade, process was stuck on php7.0-xml
  configuration for 20 minutes, after that I killed the process. I am
  not sure what additional info are required, will be happy to provide
  any.

  ProblemType: Package
  DistroRelease: Ubuntu 16.04
  Package: php7.0-xml 7.0.13-0ubuntu0.16.04.1
  ProcVersionSignature: Ubuntu 4.4.0-49.70-generic 4.4.30
  Uname: Linux 4.4.0-49-generic x86_64
  ApportVersion: 2.20.1-0ubuntu2.2
  Architecture: amd64
  Date: Fri Dec  2 09:52:06 2016
  ErrorMessage: subprocess installed post-installation script returned error 
exit status 128
  InstallationDate: Installed on 2016-03-11 (265 days ago)
  InstallationMedia: Ubuntu-GNOME 15.10 "Wily Werewolf" - Release amd64 
(20151021)
  RelatedPackageVersions:
   dpkg 1.18.4ubuntu1.1
   apt  1.2.15
  SourcePackage: php7.0
  Title: package php7.0-xml 7.0.13-0ubuntu0.16.04.1 failed to install/upgrade: 
subprocess installed post-installation script returned error exit status 128
  UpgradeStatus: Upgraded to xenial on 2016-05-07 (209 days ago)

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