It looks to me that you requested 3 tasks spread across 2 to 4 nodes.
Realize --nodes is not targeting your nodes named 2 and 4, it is a count
of how many nodes to use. You only needed 3 tasks/cpus, so that is what
you were allocated and you have 1 cpu per node, so you get 3 (of up to
4) nodes. Slurm does not give you 4 nodes because you only want 3 tasks.
You see the result in your variables:
SLURM_NNODES=3
SLURM_JOB_CPUS_PER_NODE=1(x3)
If you only want 2 nodes, make --nodes=2.
Brian Andrus
On 8/29/24 08:00, Matteo Guglielmi via slurm-users wrote:
Hi,
On sbatch's manpage there is this example for <size_string>:
--nodes=1,5,9,13
so either one specifies <minnodes>[-maxnodes] OR <size_string>.
I checked the logs, and there are no reported errors about wrong or ignored
options.
MG
________________________________
From: Brian Andrus via slurm-users<slurm-users@lists.schedmd.com>
Sent: Thursday, August 29, 2024 4:11:25 PM
To:slurm-users@lists.schedmd.com
Subject: [slurm-users] Re: playing with --nodes=<size_string>
Your --nodes line is incorrect:
-N, --nodes=<minnodes>[-maxnodes]|<size_string>
Request that a minimum of minnodes nodes be allocated to this job. A maximum
node count may also be specified with maxnodes.
Looks like it ignored that and used ntasks with ntasks-per-node as 1, giving
you 3 nodes. Check your logs and check your conf see what your defaults are.
Brian Andrus
On 8/29/2024 5:04 AM, Matteo Guglielmi via slurm-users wrote:
Hello,
I have a cluster with four Intel nodes (node[01-04], Feature=intel) and four
Amd nodes (node[05-08], Feature=amd).
# job file
#SBATCH --ntasks=3
#SBATCH --nodes=2,4
#SBATCH --constraint="[intel|amd]"
env | grep SLURM
# slurm.conf
PartitionName=DEFAULT MinNodes=1 MaxNodes=UNLIMITED
# log
SLURM_JOB_USER=software
SLURM_TASKS_PER_NODE=1(x3)
SLURM_JOB_UID=1002
SLURM_TASK_PID=49987
SLURM_LOCALID=0
SLURM_SUBMIT_DIR=/home/software
SLURMD_NODENAME=node01
SLURM_JOB_START_TIME=1724932865
SLURM_CLUSTER_NAME=cluster
SLURM_JOB_END_TIME=1724933465
SLURM_CPUS_ON_NODE=1
SLURM_JOB_CPUS_PER_NODE=1(x3)
SLURM_GTIDS=0
SLURM_JOB_PARTITION=nodes
SLURM_JOB_NUM_NODES=3
SLURM_JOBID=26
SLURM_JOB_QOS=lprio
SLURM_PROCID=0
SLURM_NTASKS=3
SLURM_TOPOLOGY_ADDR=node01
SLURM_TOPOLOGY_ADDR_PATTERN=node
SLURM_MEM_PER_CPU=0
SLURM_NODELIST=node[01-03]
SLURM_JOB_ACCOUNT=dalco
SLURM_PRIO_PROCESS=0
SLURM_NPROCS=3
SLURM_NNODES=3
SLURM_SUBMIT_HOST=master
SLURM_JOB_ID=26
SLURM_NODEID=0
SLURM_CONF=/etc/slurm/slurm.conf
SLURM_JOB_NAME=mpijob
SLURM_JOB_GID=1002
SLURM_JOB_NODELIST=node[01-03] <<<=== why three nodes? Shouldn't this still be
two nodes?
Thank you.
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