IIRC we increased SlurmdTimeout to 7200 .

Il 06/08/2021 13:33, Adrian Sevcenco ha scritto:
On 8/6/21 1:56 PM, Diego Zuccato wrote:
We had a similar problem some time ago (slow creation of big core files) and solved it by increasing the Slurm timeouts
oh, i see.. well, in principle i should not have core files, and i do not find any...

to the point that even the slowest core wouldn't trigger it. Then, once the need for core files was over, I disabled core files and restored the timeouts.
and how much did you increased them? i have
SlurmctldTimeout=300
SlurmdTimeout=300

Thank you!
Adrian



Il 06/08/2021 12:46, Adrian Sevcenco ha scritto:
On 8/6/21 1:27 PM, Diego Zuccato wrote:
Hi.
Hi!

Might it be due to a timeout (maybe the killed job is creating a core file, or caused heavy swap usage)?
i will have to search for culprit ..
the problem is why would the node be put in drain for the reason of failed killing? and how can i control/disable
this?

Thank you!
Adrian



BYtE,
  Diego

Il 06/08/2021 09:02, Adrian Sevcenco ha scritto:
Having just implemented some triggers i just noticed this:

NODELIST    NODES PARTITION       STATE CPUS    S:C:T MEMORY TMP_DISK WEIGHT AVAIL_FE REASON alien-0-47      1    alien*    draining   48   48:1:1 193324 214030      1 rack-0,4 Kill task failed alien-0-56      1    alien*     drained   48   48:1:1 193324 214030      1 rack-0,4 Kill task failed

i was wondering why a node is drained when killing of task fails and how can i disable it? (i use cgroups)
moreover, how can the killing of task fails? (this is on slurm 19.05)

Thank you!
Adrian



--
Diego Zuccato
DIFA - Dip. di Fisica e Astronomia
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