You can do it the same way in Torque/Maui
/var/slurm/prolog.sh
/export/SLURM/bin/scontrol --oneliner show job=$SLURM_JOB_ID >>
/var/slurm/records/jobs.log
SLURM_LOCAL_SCRATCH="/scratch/$SLURM_JOB_USER/$SLURM_JOBID"
SLURM_REMOTE_SCRATCH="/export/lustre/$SLURM_JOB_USER/$SLURM_JOBID"
export SLURM_LOCAL_SCRATCH SLURM_REMOTE_SCRATCH
/bin/mkdir -p $SLURM_LOCAL_SCRATCH
/bin/mkdir -p $SLURM_REMOTE_SCRATCH
/bin/chown $SLURM_JOB_USER $SLURM_REMOTE_SCRATCH
/bin/chown $SLURM_JOB_USER $SLURM_LOCAL_SCRATCH
/bin/chmod 705 $SLURM_REMOTE_SCRATCH/../../$SLURM_JOB_USER
/bin/chmod 705 $SLURM_LOCAL_SCRATCH/../../$SLURM_JOB_USER
/bin/chmod 700 $SLURM_REMOTE_SCRATCH
/bin/chmod 700 $SLURM_LOCAL_SCRATCH
/var/slurm/epilog.sh
SLURM_LOCAL_SCRATCH="/scratch/$SLURM_JOB_USER/$SLURM_JOBID"
SLURM_REMOTE_SCRATCH="/export/lustre/$SLURM_JOB_USER/$SLURM_JOBID"
export SLURM_LOCAL_SCRATCH SLURM_REMOTE_SCRATCH
/bin/rm -rf $SLURM_LOCAL_SCRATCH
/bin/rm -rf $SLURM_REMOTE_SCRATCH
/etc/profile.d/slurm.sh
if [ -n "$SLURM_JOB_NAME" ]; then
export SLURM_LOCAL_SCRATCH=/scratch/$USER/$SLURM_JOBID
export SLURM_REMOTE_SCRATCH=/export/lustre/$USER/$SLURM_JOBID
fi
set autologout=0
Cheers,
David
On 01/20/2017 11:15 AM, John Hearns wrote:
> As I remember, in SGE and in PbsPro a job has a directory created for it
> on the execution host which is a temporary directory, named with he jobid.
> you can define int he batch system configuration where the root of these
> directories is.
>
> On running srun env, the only TMPDIR I see is /tmp
> I know - RTFM. I bet I haven't realised that this si easy to set up...
>
> Specifically I would like a temprary job directory which is
> /local/$SLURM_JOBID
>
> I guess I can create this in the job then delete it, but it would be
> cleaner if the batch system deleted it and didnt allow for failed jobs
> or bad scripts leaving it on disk.
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--
David Lee Braun
Manager of Computational Facilities
for Dr Charles L. Brooks, III Ph.D.
930 N. University Ave
Chemistry 2006
