Thanks a lot Reuti,
Now ./aimk command stuck with
Could not find a path to JavaCC.zip or javacc.jar from '/usr/share/java'
BUILD FAILED
[java] /root/SGE/sge-8.1.9/source/libs/jgdi/build.xml:416: Java
returned: 1
[java]
[java] Total time: 5 seconds
BUILD FAILED
/root/SGE/sge-8.1.9/source/build.xml:85: The following error occurred while
executing this line:
/root/SGE/sge-8.1.9/source/build.xml:30: Java returned: 1
Total time: 11 seconds
not done
Can you please debug and suggest what I need to troubleshoot this isssue
On Wed, Jun 22, 2016 at 5:32 PM, Reuti <re...@staff.uni-marburg.de> wrote:
> Hi,
>
> > Am 20.06.2016 um 15:20 schrieb Himanshu Joshi <anshuhi...@gmail.com>:
> >
> > Hello SGE'rs,
> >
> > I am usinf FSL from long time. I tries to develop parallel computing
> environment using SGE and downloaded 8.1.9 version and followed the
> instructions
> > I was able to execute bootstrap.sh but while running ./aimk the
> following error occurs
> >
> >
> > "Unable to find hwloc.h"
> >
> > The terminal display is as follows
> >
> > Building in directory: /root/SGE/sge-8.1.9/source
> > making in LINUXAMD64/ for LINUXAMD64 at host localhost.localdomain
> > _________C_O_R_E__S_Y_S_T_E_M_____________
> > cc -DSGE_ARCH_STRING=\"lx-amd64\" -O2 -Wstrict-prototypes -DLINUX
> -DLINUXAMD64 -DLINUXAMD64 -D_GNU_SOURCE -DGETHOSTBYNAME_R6
> -DGETHOSTBYADDR_R8 -DTARGET_64BIT -DSGE_PQS_API -DSPOOLING_dynamic
> -DSECURE -DHAVE_HWLOC=1 -DCOMPILE_DC -D__SGE_COMPILE_WITH_GETTEXT__
> -D__SGE_NO_USERMAPPING__ -I../common -I../libs -I../libs/uti -I../libs/juti
> -I../libs/gdi -I../libs/japi -I../libs/sgeobj -I../libs/cull -I../libs/comm
> -I../libs/comm/lists -I../libs/sched -I../libs/evc -I../libs/evm
> -I../libs/mir -I../daemons/common -I../daemons/qmaster -I../daemons/execd
> -I../clients/common -I.
> -I/usr/lib/jvm/java-1.7.0-openjdk-1.7.0.101-2.6.6.1.el7_2.x86_64/include
> -I/usr/lib/jvm/java-1.7.0-openjdk-1.7.0.101-2.6.6.1.el7_2.x86_64/include/linux
> -fPIC -c ../libs/sgeobj/sge_binding.c
> > In file included from ../libs/sgeobj/sge_binding.h:43:0,
> > from ../libs/sgeobj/sge_binding.c:39:
> > ../libs/uti/sge_binding_hlp.h:45:21: fatal error: hwloc.h: No such file
> or directory
> > # include <hwloc.h>
>
> you will need to install the developer package of hwlock on your system.
>
> -- Reuti
>
>
> > ^
> > compilation terminated.
> > make: *** [sge_binding.o] Error 1
> > not done
> >
> > Thanking you in anticipation
> > Regards
> >
> > --
> > Himanshu Joshi
> > M.Tech. Cognitive & Neuroscience.
> > Ph.D Scholar,
> > Department of Psychiatry
> > NIMHANS, Bangalore
> >
> > http://mbial.weebly.com/himanshu-joshi.html
> > _______________________________________________
> > SGE-discuss mailing list
> > SGE-discuss@liv.ac.uk
> > https://arc.liv.ac.uk/mailman/listinfo/sge-discuss
>
>
--
Himanshu Joshi
M.Tech. Cognitive & Neuroscience.
Ph.D Scholar,
Department of Psychiatry
NIMHANS, Bangalore
http://mbial.weebly.com/himanshu-joshi.html
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