[Rmpi.so] Error 1
chmod: cannot access `/usr/local/lib64/R/library/Rmpi/libs/*': No such file
or directory
ERROR: compilation failed for package 'Rmpi'
** Removing '/usr/local/lib64/R/library/Rmpi'
I also tried with
R CMD INSTALL Rmpi_0.5-6.tar.gz
--configure-args=-
Dear Dirk,
many thanks for your reply, please see below,
On 13 October 2008 at 11:22, Simone Giannerini wrote:
| Dear all,
|
| I have troubles installing rmpi 0.5-5 (or 0.5-6) on a quad opteron machine
| with OpenSUSE 11.0 and
| R 2.7.2
|
| platform x86_64-unknown-linux-gnu
| arch x86_64
| os
e 'Rmpi'
** Removing '/usr/local/lib64/R/library/Rmpi'
and adding CC="mpicc" does not solve the problem
Thanks,
Simone
On Mon, Oct 13, 2008 at 3:56 PM, Simone Giannerini wrote:
> Dear Dirk,
>
> many thanks for your reply, please see below,
>
>
>
enmpi/lib
# CC="mpicc" R CMD INSTALL Rmpi_0.5-5.tar.gz
--configure-args=--with-mpi=/usr/lib64/mpi/gcc/openmpi/
# mpirun --version
mpirun (Open MPI) 1.2.5
So far so good, thanks also to *Sean Davis.*
*ciao*
*Simone*
______
Simone Gian
works only if I remove the CC directive. In any case I
confirm that I can load the package Rmpi even if I am experiencing some
problems, will study a bit and in case get back to the forum, thanks again.
--
__
Simone Giannerini
Dipartimento di S
hed the archives and found that the following suggestion was
given for a similar problem:
> Open MPI has Infiniband module compiled but there is no IB device found
> on your host. Try to add "--mca btl ^openib" string to your command
> line.
Since I am not calling mpi directl
Dear Dirk,
many thanks for your reply,
>On 17 October 2008 at 12:42, Simone Giannerini wrote:
>| Dear all,
>|
>| I managed to install successfully Rmpi 0.5-5 on a quad opteron machine (8
>| cores overall) running on OpenSUSE 11.0 and Open MPI 1.5.2.
>|
>| this is what I get
