Re: [OMPI users] can't run MPI job under SGE

2019-07-25 Thread Reuti via users
Am 25.07.2019 um 18:59 schrieb David Laidlaw via users: > I have been trying to run some MPI jobs under SGE for almost a year without > success. What seems like a very simple test program fails; the ingredients > of it are below. Any suggestions on any piece of the test, reasons for > failu

Re: [OMPI users] can't run MPI job under SGE

2019-07-25 Thread Reuti via users
Am 25.07.2019 um 23:00 schrieb David Laidlaw: > Here is most of the command output when run on a grid machine: > > dblade65.dhl(101) mpiexec --version > mpiexec (OpenRTE) 2.0.2 This is some time old. I would suggest to install a fresh one. You can even compile one in your home directory and i

Re: [OMPI users] TMPDIR for running openMPI job under grid

2019-07-26 Thread Reuti via users
Hi, Am 26.07.2019 um 21:12 schrieb Kulshrestha, Vipul via users: > Hi, > > I am trying to setup my open-mpi application to run under grid. > > It works sometimes, but sometimes I get the below error. I have contacted my > grid site administrator and the message from them is that they cannot

Re: [OMPI users] can't run MPI job under SGE

2019-07-29 Thread Reuti via users
> Am 29.07.2019 um 17:17 schrieb David Laidlaw : > > I will try building a newer ompi version in my home directory, but that will > take me some time. > > qconf is not available to me on any machine. It provides that same error > wherever I am able to try it: > > denied: host "..." is neithe

Re: [OMPI users] mpirun --output-filename behavior

2019-11-01 Thread Reuti via users
> Am 01.11.2019 um 14:46 schrieb Jeff Squyres (jsquyres) via users > : > > On Nov 1, 2019, at 9:34 AM, Jeff Squyres (jsquyres) via users > wrote: >> >>> Point to make: it would be nice to have an option to suppress the output on >>> stdout and/or stderr when output redirection to file is re

Re: [OMPI users] Univa Grid Engine and OpenMPI 1.8.7

2020-01-12 Thread Reuti via users
Hi, Am 12.01.2020 um 07:15 schrieb Lane, William via users: > I'm having problems w/an old openMPI test program which I re-compiled using > OpenMPI 1.8.7 for CentOS 6.3 running Univa Grid Engine 8.6.4. IIRC at that time it was necessary to compile Open MPI explicitly with --with-sge. Any newer

Re: [OMPI users] running mpirun with grid

2020-02-06 Thread Reuti via users
Hi, > Am 06.02.2020 um 21:47 schrieb Kulshrestha, Vipul via users > : > > Hi, > > I need to launch my openmpi application on grid. > > My application is designed to run N processes, where each process would have > M threads. > > To run it without grid, I run it as (say N = 7, M = 2) > % m

Re: [OMPI users] Moving an installation

2020-07-24 Thread Reuti via users
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Hi, Am 24.07.2020 um 18:55 schrieb Lana Deere via users: > I have open-mpi 4.0.4 installed on my desktop and my small test programs are > working. > > I would like to migrate the open-mpi to a cluster and run a larger program > there. When moved,

Re: [OMPI users] segfault in libibverbs.so

2020-07-27 Thread Reuti via users
Am 27.07.2020 um 21:18 schrieb Prentice Bisbal via users: > Can anyone explain why my job still calls libibverbs when I run it with '-mca > btl ^openib'? A similar behavior I observed too in a mixed cluster where some nodes have InfiniBand and others not. Even checking the node beforehand and

Re: [OMPI users] Issues with compilers

2021-01-22 Thread Reuti via users
Hi, what about putting the "-static-intel" into a configuration file for the Intel compiler. Besides the default configuration, one can have a local one and put the path in an environment variable IFORTCFG (there are other ones for C/C++). $ cat myconf --version $ export IFORTCFG=/home/reuti/m

[OMPI users] RUNPATH vs. RPATH

2022-07-22 Thread Reuti via users
Hi, using Open MPI 4.1.4 $ mpicc --show … tells me, that the command line contains "… -Wl,--enable-new-dtags …" so that even older linkers will include RUNPATH instead of RPATH in the created dynamic binary. On the other hand, Open MPI itself doesn't use this option for its own libraries: ./

Re: [OMPI users] RUNPATH vs. RPATH

2022-08-09 Thread Reuti via users
t; https://ompi--10624.org.readthedocs.build/en/10624/installing-open-mpi/configure-cli-options/installation.html). > We're not 100% confident in that text yet, but I think we're close to at > least documenting what the current behavior is. Once we nail that down, we > can ta