Dear mail-list users,
I have a problem when I try to run a parallel gromacs job on fedora core 15.
The same job (same installation options and network-setup) for fedora core 13
works fine. I already tried it in a fedora forum but I could not find a
solution there ...
[terminal output start]
hostname not known only in fedora 15
*From:* Jeffrey Squyres (/jsquyres_at_[hidden]/)
*Date:* 2012-04-19 09:21:35
What happens if you "dig quoVadis27"?
If you don't get a valid answer back, then it's not a resolvable name.
On Apr 19, 2012, at 6:42 AM, Bernhard Knapp wrote:
Dea
Dear users
I am using the parallel software Gromacs on Fedora8 nodes. I installed
the software and run it without problems but thereafter I moved the node
to our server-room and did the following:
- set ip adress, subnetmask and gateway
- changed the ssh port in /etc/ssh/sshd_config since we u
es I'm not quite
sure what you did here; did you set the IP address and hostname to
something that is resolvable via gethostbyname()? E.g., does the
hostname exist in DNS or in /etc/hosts and match the IP address that you
set? On Feb 6, 2009, at 6:18 AM, Bernhard Knapp wrote:
Dear users
Hi
I want to start a gromacs simulation on a small cluster where non
standard ports are used for ssh. If I just use a "normal" maschinelist
file (with the ips of the nodes), consequently, the following error
comes up:
ssh: connect to host 192.168.0.103 port 22: Connection refused
I guess tha
come on, it must be somehow possible to use openmpi not on port 22!? ;-)
--
Message: 3
Date: Tue, 17 Mar 2009 09:45:29 +0100
From: Bernhard Knapp
Subject: [OMPI users] open mpi on non standard ssh port
To: us...@open-mpi.org
Message-ID: <49bf6329.8
no results are
written ...
Was the port redirection of 22 not enough or is there another problem?
thx
Bernhard
Original Message
Subject:Re: open mpi on non standard ssh port
List-Post: users@lists.open-mpi.org
Date: Wed, 18 Mar 2009 09:19:18 +0100
From: Bernhard Kn
Hi
I am trying to get a parallel job of the gromacs software started. MPI
seems to boot fine but unfortunately it seems not to be able to open a
specified file although it is definitly in the directory where the job
is started. I also changed the file permissions to 777 but it does not
affect
he daemon is started. However, I know that we didn't do
that in some earlier versions - perhaps in the 1.2.x series as well.
Ralph
On Apr 7, 2009, at 5:05 AM, Bernhard Knapp wrote:
Hi
I am trying to get a parallel job of the gromacs software started.
MPI seems to boot fine but unfortun
