Re: [OMPI users] Windows: msv*.dll files presence in Release build

2011-07-05 Thread Shiqing Fan
Hi Hiral, They are dependent libraries for OMPI libraries. It's the default behavior using CMake. How to aviod this? Any workaround or fix? I'm not sure if it's possible. The msvc dll files are copied for new installation on computers, which might not have the required dependencies. The

[OMPI users] OpenMPI on Tile architectures (no atomic primitives)

2011-07-05 Thread Charles Bouillaguet
Hi all, We have gotten our hands on a machine with a bunch of TilePro64 processors (which seems to be a MIPS-like architecture). It runs linux, has gcc, and I was only dreaming to compile openmpi on it. However compilation fails with the errir "no atomic primitives available for tile-unknown-linu

Re: [OMPI users] OpenMPI on Tile architectures (no atomic primitives)

2011-07-05 Thread Ralph Castain
I very much doubt we have Tile support as it hasn't come up before. If you look in opal/asm/base, you'll see a MIPS.asm that contains the MIPS code - perhaps you could use that as a starting point? I didn't write any of that code, but I think if you poke around that directory looking for "MIPS"

Re: [OMPI users] File seeking with shared filepointer issues

2011-07-05 Thread Rob Latham
On Mon, Jun 27, 2011 at 03:20:36PM +0200, pascal.dev...@bull.net wrote: > > Christian, > > Suppose you have N processes calling the first MPI_File_get_position_shared > (). > > Some of them are running faster and could execute the call to > MPI_File_seek_shared() before all the other have got th

Re: [OMPI users] mpirun does not propagate environment from master node to slave nodes

2011-07-05 Thread yanyg
Thanks, Ralph. Your information is very deep and detailed. I tried with your suggestion to set ""-mca plm_rsh_assume_same_shell 0", it still does not work though. My situation is that we start a c-shell script from bash shell, which in turn invokes mpirun to other slave nodes. These slave nodes

[OMPI users] MPI_Reduce error over Infiniband or TCP

2011-07-05 Thread yanyg
Dear all, We are testing Open MPI over Infiniband, and got a MPI_Reduce error message when we run our codes either over TCP or Infiniband interface, as follows, --- [gulftown:25487] *** An error occurred in MPI_Reduce [gulftown:25487] *** on communicator MPI COMMUNICATOR 3 CREATE FROM 0 [gulft

Re: [OMPI users] MPI_Reduce error over Infiniband or TCP

2011-07-05 Thread Ralph Castain
Looks like your code is passing an invalid argument to MPI_Reduce... On Jul 5, 2011, at 9:20 AM, ya...@adina.com wrote: > Dear all, > > We are testing Open MPI over Infiniband, and got a MPI_Reduce > error message when we run our codes either over TCP or > Infiniband interface, as follows, >

Re: [OMPI users] mpirun does not propagate environment from master node to slave nodes

2011-07-05 Thread Ralph Castain
Let me get this straight. You are executing mpirun from inside a c-shell script, launching onto nodes where you will by default be running bash. The param I gave you should support that mode - it basically tells OMPI to probe the remote node to discover what shell it will run under there, and th

Re: [OMPI users] Problems with Mpi Accept - ORTE_ERROR_LOG

2011-07-05 Thread Rodrigo Oliveira
Hi Ralph. The version you have suggested works properly. Thank you so much for the attention. On Mon, Jul 4, 2011 at 3:42 PM, Ralph Castain wrote: > If you download a 1.5 tarball tagged at r24853 or above, the problem should > be fixed. > > > On Jul 4, 2011, at 12:34 PM, Rodrigo Oliveira wrote

[OMPI users] Running MPI jobs from external Hard Disk

2011-07-05 Thread Chaudhari, Mangesh I
hi all, I m trying to run a job from external hard disk and its giving me errors my output log is as follows Currently Loaded Modulefiles: 1) modules 4) mpich/mpich-mx-1.2.7..7-gcc.64 2) tools/torque-maui5) tools/amber10-mx 3) tools/mx Host: node

[OMPI users] mpi & mac

2011-07-05 Thread Robert Sacker
Hi all, I need some help. I'm trying to run C++ code in Xcode on a Mac Pro Desktop (OS 10.6) and utilize all 8 cores . My ultimate goal is to be able to run the code on the cluster here on campus. I'm in the process of converting into C++ the number crunching part of the stuff I previous

Re: [OMPI users] Running MPI jobs from external Hard Disk

2011-07-05 Thread Ralph Castain
I don't see Open MPI in your list of modules - looks to me like you are using MPICH? If so, you should send this to their mailing list. On Jul 5, 2011, at 1:44 PM, Chaudhari, Mangesh I wrote: > hi all, > > I m trying to run a job from external hard disk and its giving me errors my > output l

[OMPI users] tcp communication problems with 1.4.3 and 1.4.4 rc2 on FreeBSD

2011-07-05 Thread Steve Kargl
I have an application that appears to function as I expect when compiled with openmpi-1.4.2 on FreeBSD 9.0. But, it appears to hang during communication between nodes. What follows is the long version. I configure 1.4.2 with ./configure --prefix=/usr/local/openmpi-1.4.2 \ --enable-mpirun-prefi

Re: [OMPI users] tcp communication problems with 1.4.3 and 1.4.4 rc2 on FreeBSD

2011-07-05 Thread Steve Kargl
On Tue, Jul 05, 2011 at 01:14:06PM -0700, Steve Kargl wrote: > I have an application that appears to function as I expect > when compiled with openmpi-1.4.2 on FreeBSD 9.0. But, it > appears to hang during communication between nodes. What > follows is the long version. Argh I messed up. It sho