Re: [OMPI users] MPI process dies with a route error when using dynamic process calls to connect more than 2 clients to a server with InfiniBand

2010-07-20 Thread Ralph Castain
Well, I finally managed to make this work without the required ompi-server rendezvous point. The fix is only in the devel trunk right now - I'll have to ask the release managers for 1.5 and 1.4 if they want it ported to those series. On the notion of integrating OMPI to your launch environment:

[OMPI users] does OpenMPI 1.3.2 support MPI 2.2 standard?

2010-07-20 Thread Anton Shterenlikht
Hi Does OpenMPI 1.3.2 support MPI 2.2 standard? I didn't get a clear answer from our sysadmin. many thanks anton -- Anton Shterenlikht Room 2.6, Queen's Building Mech Eng Dept Bristol University University Walk, Bristol BS8 1TR, UK Tel: +44 (0)117 331 5944 Fax: +44 (0)117 929 4423

Re: [OMPI users] does OpenMPI 1.3.2 support MPI 2.2 standard?

2010-07-20 Thread Jeff Squyres
On Jul 20, 2010, at 6:42 AM, Anton Shterenlikht wrote: > Does OpenMPI 1.3.2 support MPI 2.2 standard? No; it supports MPI-2.1. -- Jeff Squyres jsquy...@cisco.com For corporate legal information go to: http://www.cisco.com/web/about/doing_business/legal/cri/

Re: [OMPI users] Dynamic processes connection and segfault on MPI_Comm_accept

2010-07-20 Thread Ralph Castain
Grzegorz: something occurred to me. When you start all these processes, how are you staggering their wireup? Are they flooding us, or are you time-shifting them a little? On Jul 19, 2010, at 10:32 AM, Edgar Gabriel wrote: > Hm, so I am not sure how to approach this. First of all, the test case

Re: [OMPI users] mpiexec seems to be resolving names on server insteadof each node

2010-07-20 Thread Jeff Squyres
Micha -- (re-digging up this really, really old issue because Manuel just pointed me at the Debian bug for the same issue: http://bugs.debian.org/cgi-bin/bugreport.cgi?bug=524553) Can you confirm that this is still an issue on the latest Open MPI? If so, it should probably piggyback onto this

[OMPI users] Partitioning problem set data

2010-07-20 Thread Alexandru Blidaru
Hi, I have a 3D array, which I need to split into equal n parts, so that each part would run on a different node. I found the picture in the attachment from this website ( https://computing.llnl.gov/tutorials/parallel_comp/#DesignPartitioning) on the different ways to partition data. I am interest

Re: [OMPI users] Partitioning problem set data

2010-07-20 Thread Alexandru Blidaru
If there is an already existing implementation of the *Block or Block* methods that splits the array and sends the individual pieces to the proper nodes, can you point me to it please? On Tue, Jul 20, 2010 at 9:52 AM, Alexandru Blidaru wrote: > Hi, > > I have a 3D array, which I need to split int

Re: [OMPI users] Dynamic processes connection and segfault on MPI_Comm_accept

2010-07-20 Thread Grzegorz Maj
My start script looks almost exactly the same as the one published by Edgar, ie. the processes are starting one by one with no delay. 2010/7/20 Ralph Castain : > Grzegorz: something occurred to me. When you start all these processes, how > are you staggering their wireup? Are they flooding us, or

Re: [OMPI users] Partitioning problem set data

2010-07-20 Thread Eugene Loh
The reason so many different distributions are described is because what is optimal depends so much on your own case. Even if one disregards CYCLIC axes, there are still all those BLOCK choices you mention.  It isn't just a matter of choosing which axes will be * since * is just a special case