[OMPI users] Windows: problems running on a second system.

2010-03-14 Thread cjohnson
Finally got a second development system procured and up and running.Got things working pretty wellon one node, installed on the second and things work there.This may be a similar problem to Charles Shuller's a month ago, maybe not. Tried to launch a program from node work on node work2:C:\prog\mon\

[OMPI users] Windows: problems running on a second system. 2nd try.

2010-03-14 Thread cjohnson
For some reason the OpenMPI content filter tossed this message, so I'm sending it again:___Finally got a second development system procured and up and running.Got things working pretty well on one node, installed on the second and things work

[OMPI users] OMPI looking for PBS file?

2010-03-14 Thread John R. Cary
I have a script that launches a bunch of runs on some compute nodes of a cluster. Once I get through the queue, I query PBS for my machine file, then I copy that to a local file 'nodes' which I use for mpiexec: mpiexec -machinefile /home/research/cary/projects/vpall/vptests/nodes -np 6 /hom e/r

Re: [OMPI users] OMPI looking for PBS file?

2010-03-14 Thread Josh Bernstein
Hi John, Mpiexec isn't needed with OMPI, in fact if you are using the one from OSC, it only works with MPICH. Instead just build OMPI with --with-tm, and it will link against TORQUE and start up and track jobs properly. -Joshua Bernstein Penguin Computing On Mar 14, 2010, at 21:35, "John

[OMPI users] mpirun over infiniband.

2010-03-14 Thread nad labassi
Hi, My problem is: I installed openmpi 1.2.9, with mvapi support, but the execution is done on ethernet, unless I use ipoib. I built openmpi with the command: ./configure CC=/home/pgi/linux86-64/6.2/bin/pgcc CXX=/home/pgi/linux86-64/6.2/bin/pgCC FC=/home/pgi/linux86-64/6.2/bin/pgf90 --without

Re: [OMPI users] OMPI looking for PBS file?

2010-03-14 Thread Ralph Castain
Just to clarify: OMPI is launched with either mpirun or mpiexec commands, so long as your path is pointing to the correct OMPI installation. This looks like that is the case as the error message comes from us. It really, really helps if you tell us what version of OMPI you are using. Some older

Re: [OMPI users] mpirun over infiniband.

2010-03-14 Thread Ralph Castain
I'm afraid I'm confused by your question, so please clarify: the hostnames that have ethernet interfaces do NOT have infiniband interfaces on them? If so, why would you expect OMPI to use infiniband when you execute on those hosts? Or do they contain an infiniband interface in addition to the et

[OMPI users] make check failure on Solaris 10 (SPARC)

2010-03-14 Thread Dr. David Kirkby
I'm trying to build Open MPI version 1.4.1 on a Sun Blade 1000 running Solaris 10 03/2005 using gcc 4.4.3. But the build is not working properly. Any help appreciated. (BTW, gcc is configured to use the Sun linker and assembler - not the GNU ones.) $ configure $ make both run ok, but $ make

Re: [OMPI users] make check failure on Solaris 10 (SPARC)

2010-03-14 Thread Dr. David Kirkby
Oops, I forgot to attach config.log.gz Dr. David Kirkby wrote: I'm trying to build Open MPI version 1.4.1 on a Sun Blade 1000 running Solaris 10 03/2005 using gcc 4.4.3. But the build is not working properly. Any help appreciated. (BTW, gcc is configured to use the Sun linker and assembler - n