[OMPI users] [PMX:VIRUS] MPI debugger

2010-01-08 Thread Arunkumar C R
The original content of this message part has been replaced by this text because it tested positive for the following virus(es): SOPHOS_SAVI_ERROR_OLD_VIRUS_DATA The original message has been quarantined pending further action by the mail administrator. For further information about the mess

[OMPI users] [PMX:VIRUS] Sophos virus

2010-01-08 Thread Jeff Squyres
The original content of this message part has been replaced by this text because it tested positive for the following virus(es): SOPHOS_SAVI_ERROR_OLD_VIRUS_DATA The original message has been quarantined pending further action by the mail administrator. For further information about the mess

Re: [OMPI users] Memory corruption?

2010-01-08 Thread Roy Dragseth
> Hi. > > We have started to scale up one of our codes and sometimes we get messages > like this: > > [c9-13.local:31125] Memory 0x2aaab7b64000:217088 cannot be freed from > the registration cache. Possible memory corruption. > > It seems like the application runs normally and it does not crash

[OMPI users] problem with progress thread and orte

2010-01-08 Thread Dong Li
Hi, guys. My application got stuck when I run an application with Open MPI 1.4 with progress thead enabled. The OpenMPI is configured and compiled with the following options. ./configure --with-openib=/usr --enable-trace --enable-debug --enable-peruse --enable-progress-threads Then I started the

Re: [OMPI users] problem with progress thread and orte

2010-01-08 Thread Ralph Castain
Yeah, the system doesn't currently support enable-progress-threads. It is a two-fold problem: ORTE won't work that way, and some parts of the MPI layer won't either. I am currently working on fixing ORTE so it will work with progress threads enabled. I believe (but can't confirm) that the TCP B

[OMPI users] MPI debugger

2010-01-08 Thread Arunkumar C R
Hi all, I do MPI programs using Fortran 90 in a Quad Core Machine with Fedora OS. Could any one of you suggest a good debugger to resolve the compilation/ run time errors? Thanking you Sincerely, arun ** Arunkumar C R Solid State & Structural

[OMPI users] Sophos virus

2010-01-08 Thread Jeff Squyres
Well it looks like the Sophos virus is making the rounds today. :-) Thankfully, the Indiana U. virus scanner found and removed the virus before it was delivered to our lists. I've moderated the two members who appear to have sent the virus messages, so hopefully we won't get those messages aga

[OMPI users] 1.4 OpenMPI build not working well with TotalView on Darwin

2010-01-08 Thread Peter Thompson
I've tried a few builds of 1.4 on Snow Leopard, and trying to start up TotalView gets some of the more 'standard' problems. Either the typdef for MPIR_PROCDESC can't be found, or MPIR_PROCTABLE is missing. You can get things to work if you start up TotalView first and then pick your program an

Re: [OMPI users] Sophos virus

2010-01-08 Thread Jeff Squyres
Thanks for all the helpful off-list replies. Note that this mail was sent about 11 hours ago; it was sent when we thought that some members of the list had caught a virus. Unfortunately, this mail, too, was caught in the problem -- the IU admins apparently just released it from the incorrectly