Re: [OMPI users] open-mpi ssh hostname problem

2009-02-09 Thread Bernhard Knapp
Thanks for the hint. If I set the hostname via the console command hostname it does not work but if I use the GUI instead to change the name it works fine (problem solved). May be there are more commands necessary than simply hostname to make it running on the console? Bernhard

Re: [OMPI users] Job hangs when daemon does not report back from remote machine

2009-02-09 Thread Ralph Castain
The default launcher is ssh - the "rsh" things you see are the name of the particular component, not the name of the actual command being used. That launcher looks for "ssh" first, and then falls back to "rsh" if ssh isn't found. OMPI currently doesn't support restricted port ranges. We are

[OMPI users] Linux Itanium Configure and Make Logs for 1.2.8

2009-02-09 Thread Iannetti, Anthony C. (GRC-RTB0)
I have attached the ./configure and make all output for version 1.2.8 as directed in the Open MPI "Getting Help" section. Hopefully, this will guide us on what is going on with the 1.3 assembler code. Tony Anthony C. Iannetti, P.E. NASA Glenn Research Center Aeropropulsion Division, Combus

Re: [OMPI users] Job hangs when daemon does not report back from remote machine

2009-02-09 Thread Kersey Black
Thanks much for all the help. I will work to wall things off, but as the means of doing that is not obvious with the way the network is configured, I will also be watchful for new versions which might provide options for this situation. Cheers, Kersey On Feb 10, 2009, at 2:54 AM, Ralph Ca

Re: [OMPI users] Linux Itanium Configure and Make Logs for 1.2.8

2009-02-09 Thread Joe Griffin
Tony, My compile line with the error was the following. I believe the one you had with the error was similar: icc -DHAVE_CONFIG_H -I. -I../../opal/include -I../../orte/include -I../../ompi/include -I../../opal/mca/paffinity/linux/plpa/src/libplpa -I../.. \ -O3 -DNDEBUG -finline-functions -

Re: [OMPI users] Open MPI 1.3 segfault on amd64 with Rmpi

2009-02-09 Thread Dirk Eddelbuettel
To bring closure to this thread, we found that the following simple patch to Rmpi/src/Rmpi.c fixes the problem: --- rmpi-0.5-6.orig/src/Rmpi.c +++ rmpi-0.5-6/src/Rmpi.c @@ -63,7 +63,7 @@ else { #ifdef OPENMPI - dlopen("libmpi.so.0", RTLD_GLOBAL); + dlopen("libmpi.so.0", RTL

Re: [OMPI users] Linux Itanium Configure and Make Logs for 1.2.8

2009-02-09 Thread Brian W. Barrett
Joe - There are two different files being discussed, which might be the cause of the confusion. And this is really complicated, undocumented code I'm shamefully responsible for, so the confusion is quite understandable :). There's asm.c, which on all non-Sparc v8 platforms just pre-processes

[OMPI users] undefined symbol: tm_init

2009-02-09 Thread Brett Pemberton
Hey, I've just installed OpenMPI 1.3 on our cluster, and am getting this issue on jobs > 1 node. mpiexec: symbol lookup error: /usr/local/openmpi/1.3-pgi/lib/openmpi/mca_plm_tm.so: undefined symbol: tm_init As reported before, I saw someone saying that they solved this with: --enable-mca-

Re: [OMPI users] Linux Itanium Configure and Make Logs for 1.2.8

2009-02-09 Thread Joe Griffin
Hi Brian, First off I want to thank you and Jeff for all the work you do. The issue was actually Tony's. I got involved just because I have a few itaniums and was willing to try. Sorry I did not notice the asm.c and atomic-asm.S ... argh ... been too long a day. So .. the real question i