[OMPI users] qsub - mpirun problem

2008-09-28 Thread Zhiliang Hu
I have asked this question on TorqueUsers list. Responses from that list suggests that the question be asked on this list: The situation is: I can submit my jobs as in: > qsub -l nodes=6:ppn=2 /path/to/mpi_program where "mpi_program" is: /path/to/mpirun -np 12 /path/to/my_program -- however e

Re: [OMPI users] qsub - mpirun problem

2008-09-28 Thread Ralph Castain
Hi Zhiliang First thing to check is that your Torque system is defining and setting the environmental variables we are expecting in a Torque system. It is quite possible that your Torque system isn't configured as we expect. Can you run a job and send us the output from "printenv | grep P

Re: [OMPI users] qsub - mpirun problem

2008-09-28 Thread Zhiliang Hu
Ralph, Thank you for your quick response. Indeed as you expected, "printenv | grep PBS" produced nothing. BTW, I have: > qmgr -c 'p s' # Create queues and set their attributes. # # # Create and define queue default # create queue default set queue default queue_type = Execution set queue defau