I've released a 64 bit version of parallelknoppix, a live CD that lets you set
up a cluster for MPI-based parallel computing in about 10 minutes, without
installing anything to the computers in the cluster. openmpi v1.2.1 (and lam and
mpich) are all supported. Test reports are welcome, since thi
On 4/27/07, Götz Waschk wrote:
I'm testing my new cluster installation with the hpcc benchmark and
openmpi 1.2.1 on RHEL5 32 bit. I have some trouble with using a
threaded BLAS implementation. I have tried ATLAS 3.7.30 compiled with
pthread support. It crashes as reported here:
[...]
I have a
we use torque and tm for spawing mpi jobs on our cluster.
We have a user who will be using mpiBlast. From their documentation
they have:
"Running a query on 25 nodes would look like:
mpirun -np 27 mpiblast --config-file=/path/to/mpiblast.conf -p blastn
-d nt -i blast_query.fas -o blast_resu
