Re: [OMPI users] performance of MPI_Iallgatherv

2014-04-08 Thread Zehan Cui
Thanks, it looks like I have to do the overlapping myself. On Tue, Apr 8, 2014 at 5:40 PM, Matthieu Brucher wrote: > Yes, usually the MPI libraries don't allow that. You can launch > another thread for the computation, make calls to MPI_Test during that > time and join at the end. > > Cheers, >

Re: [OMPI users] performance of MPI_Iallgatherv

2014-04-08 Thread Matthieu Brucher
Yes, usually the MPI libraries don't allow that. You can launch another thread for the computation, make calls to MPI_Test during that time and join at the end. Cheers, 2014-04-07 4:12 GMT+01:00 Zehan Cui : > Hi Matthieu, > > Thanks for your suggestion. I tried MPI_Waitall(), but the results are

Re: [OMPI users] performance of MPI_Iallgatherv

2014-04-07 Thread Nathan Hjelm
There is no async progress in Open MPI at this time so this is the expected behavior. We plan to fix this for the 1.9 release series. -Nathan Hjelm HPC-5, LANL On Mon, Apr 07, 2014 at 11:12:06AM +0800, Zehan Cui wrote: > Hi Matthieu, > > Thanks for your suggestion. I tried MPI_Waitall(), but the

Re: [OMPI users] performance of MPI_Iallgatherv

2014-04-06 Thread Zehan Cui
Hi Matthieu, Thanks for your suggestion. I tried MPI_Waitall(), but the results are the same. It seems the communication didn't overlap with computation. Regards, Zehan On 4/5/14, Matthieu Brucher wrote: > Hi, > > Try waiting on all gathers at the same time, not one by one (this is > what non b

Re: [OMPI users] performance of MPI_Iallgatherv

2014-04-05 Thread Matthieu Brucher
Hi, Try waiting on all gathers at the same time, not one by one (this is what non blocking collectives are made for!) Cheers, Matthieu 2014-04-05 10:35 GMT+01:00 Zehan Cui : > Hi, > > I'm testing the non-blocking collective of OpenMPI-1.8. > > I have two nodes with Infiniband to perform allgath