On Nov 17, 2016, at 3:43 PM, Gilles Gouaillardet
wrote:
>
> if it still does not work, you can
> cd ompi/tools
> make V=1
>
> and post the output
Let me add to that: if that doesn't work, please send all the information
listed here:
https://www.open-mpi.org/community/help/
--
Jeff Squy
Hi,
at first, you might want to remove path related to Intel MPI runtime
(e.g. /opt/intel/composer_xe_2013_sp1.2.144/mpirt/lib/intel64) from
your environment
if you are using bash, double check you
export LD_LIBRARY_PATH
(otherwise echo $LD_LIBRARY_PATH and the linker see different things)
then
That's a stumper. Only thing I can think of is that the
LD_LIBRARY_PATH is being overwritten somewhere inside the Makefile, or
perhaps that it isn't properly exported...?
As a graspable straw, try
$ set -a
to export all variables, then
$ source /opt/intel/composer_xe_2013_sp1.2.144/bin/compile
The .configure is:
./configure PREFIX=/opt/openmpi-2.0.1-intel-14.0.2 CC=icc CXX=icpc
F77=ifort FC=ifort
and the output from printenv | grep LIBRARY is:
LIBRARY_PATH=/opt/intel/composer_xe_2013_sp1.2.144/compiler/lib/intel64:/opt/intel/composer_xe_2013_sp1.2.144/ipp/../compiler/lib/intel64:/o
Can you include your entire ./configure line? Also, it would be
useful, perhaps to look at the output of
$ printenv | grep LIBRARY
to make sure that all Intel library paths made it into the appropriate
variables.
When I build 1.10.2, I had these:
LIBRARY_PATH=/sw/arcts/centos7/intel/2013.1.046
Yes, ifort -v and icpc -v give ifort version 14.0.2 and icpc version
14.0.2 (gcc version 4.8.0 compatibility)
Bill
Professor W P Jones, FREng
Department of Mechanical Engineering
Imperial College London
Exhibition Road
London SW7 2AZ
Tel:+44 (0)20 7594 7037/7033
Mobile +44 (0)776 495 9702
On 11/17/2016 8:45 AM, Professor W P Jones wrote:
> Hi
>
> I am trying to install openmpi-2.0.1 togeter with the version 14.0.2
> intel compilers and I an having problems. The configure script with
> CC=icc CXX=icpc and FC=ifort runs successfully but when i issue make
> all install this fails wi
Hi
I am trying to install openmpi-2.0.1 togeter with the version 14.0.2
intel compilers and I an having problems. The configure script with
CC=icc CXX=icpc and FC=ifort runs successfully but when i issue make all
install this fails with the output:
Making all in tools/ompi_info
make[2]: En
>
> Regards,
>
>
>
> _MAC
>
>
>
> *From:* users [mailto:users-boun...@lists.open-mpi.org] *On Behalf Of *Limin
> Gu
> *Sent:* Tuesday, October 11, 2016 7:33 PM
>
> *To:* Open MPI Users
> *Subject:* Re: [OMPI users] Openmpi 2.0.1 build --with-psm2 failed on
Hi Limin,
One more detail. I advise to use a stable release:
https://github.com/01org/opa-psm2/releases
Regards,
_MAC
From: users [mailto:users-boun...@lists.open-mpi.org] On Behalf Of Limin Gu
Sent: Tuesday, October 11, 2016 7:33 PM
To: Open MPI Users
Subject: Re: [OMPI users] Openmpi 2.0.1
; Note that newer rpm are named hfi1-psm*
>
>
>
>
>
> _MAC
>
>
>
> *From:* users [mailto:users-boun...@lists.open-mpi.org] *On Behalf Of *Limin
> Gu
> *Sent:* Tuesday, October 11, 2016 6:44 PM
> *To:* Open MPI Users
> *Subject:* Re: [OMPI users] Openmpi 2.0.1
Users
Subject: Re: [OMPI users] Openmpi 2.0.1 build --with-psm2 failed on CentOS 7.2
Thanks Gilles!
Limin
On Tue, Oct 11, 2016 at 9:33 PM, Gilles Gouaillardet
mailto:gil...@rist.or.jp>> wrote:
Limin,
It seems libpsm2 provided by Centos 7 is a bit too old
all symbols are prefixe
about the version being used.
>> Some things to share:
>>
>>
>>
>> >rpm -qi libpsm2-0.7-4.el7.x86_64
>>
>> > objdump –p /usr/lib64/libpsm2.so |grep SONAME
>>
>> >nm /usr/lib64/libpsm2.so |grep psm2_mq_irecv2 (will not work if the lib
&
not work if the
lib Stripped)
Thanks,
_MAC
*From:*users [mailto:users-boun...@lists.open-mpi.org
<mailto:users-boun...@lists.open-mpi.org>] *On Behalf Of *Limin Gu
*Sent:* Tuesday, October 11, 2016 2:58 PM
*To:* Open MPI Users mailto:users@lists.open-mpi.org
;
> Thanks,
>
> _MAC
>
>
>
> *From:* users [mailto:users-boun...@lists.open-mpi.org] *On Behalf Of *Limin
> Gu
> *Sent:* Tuesday, October 11, 2016 2:58 PM
> *To:* Open MPI Users
> *Subject:* [OMPI users] Openmpi 2.0.1 build --with-psm2 failed on CentOS
> 7.2
;
> Thanks,
> _MAC
>
> From: users [mailto:users-boun...@lists.open-mpi.org] On Behalf Of Limin Gu
> Sent: Tuesday, October 11, 2016 2:58 PM
> To: Open MPI Users
> Subject: [OMPI users] Openmpi 2.0.1 build --with-psm2 failed on CentOS 7.2
>
> Hi All,
>
> I am tryi
.so |grep psm2_mq_irecv2 (will not work if the lib
>Stripped)
Thanks,
_MAC
From: users [mailto:users-boun...@lists.open-mpi.org] On Behalf Of Limin Gu
Sent: Tuesday, October 11, 2016 2:58 PM
To: Open MPI Users
Subject: [OMPI users] Openmpi 2.0.1 build --with-psm2 failed on CentOS 7.2
Hi All,
Hi All,
I am trying to build openmpi 2.0.1 on a CentOS 7.2 system, and I have
following libpsm2 packages installed:
libpsm2-0.7-4.el7.x86_64
libpsm2-compat-0.7-4.el7.x86_64
libpsm2-compat-devel-0.7-4.el7.x86_64
libpsm2-devel-0.7-4.el7.x86_64
I added --with-psm2 to my configure, but it failed:
-
Yes, that is the plan :-)
the patch (pending for review) can be downloaded at
https://patch-diff.githubusercontent.com/raw/open-mpi/ompi/pull/2131.patch
(and the Pull Request is at
https://github.com/open-mpi/ompi/pull/2131/files)
Cheers,
Gilles
On 9/28/2016 3:36 AM, Limin Gu wrote:
T
Thanks Gilles!
I added "static" keyword as you suggested, the build succeeded.
Will this be fixed in later release?
Thanks again!
*Limin Gu* | Software Engineer
*Penguin Computing*
45800 Northport Loop West
Fremont, CA 94 538
*p.* *415.954.2800 <415.954.2800>
Hi,
I can see this error happening if you configure with --disable-dlopen
--with-pmi
In opal/mca/pmix/s?/pmix_s?.c, you can try to add the static keyword before
OBJ_CLASS_INSTANCE(pmi_opcaddy_t, ...)
Or you can update the files to use unique class name (probably safer...)
Cheers,
Gilles
On Wed
Hi,
I have openmpi-2.0.1 same build error on Centos 6.8 and Centos 7.2,
Any idea what might have caused this problem?
Thank you!
make[2]: Entering directory `/usr/src/redhat/BUILD/openmpi-2.0.1/opal'
CC class/opal_bitmap.lo
CC class/opal_free_list.lo
CC class/opal_hash
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