Re: [OMPI users] machinefile binding error

2015-02-25 Thread Ralph Castain
ts/users/2014/05/24467.php> > > Thanks for the help, > --Jack > > > From: users [mailto:users-boun...@open-mpi.org] On Behalf Of Ralph Castain > Sent: Tuesday, February 24, 2015 3:24 PM > To: Open MPI Users > Subject: Re: [OMPI users] machinefile binding error &

Re: [OMPI users] machinefile binding error

2015-02-25 Thread Galloway, Jack D
i.org] On Behalf Of Ralph Castain Sent: Tuesday, February 24, 2015 3:24 PM To: Open MPI Users Subject: Re: [OMPI users] machinefile binding error It looks to me like some of the nodes don’t have the required numactl packages installed. Why don’t you try launching the job without binding, just to see if

Re: [OMPI users] machinefile binding error

2015-02-24 Thread Ralph Castain
- > > Thanks, > --Jack > > > > > From: users [mailto:users-boun...@open-mpi.org > <mailto:users-boun...@open-mpi.org>] On Behalf Of Galloway, Jack D > Sent: Tuesday, February 24, 2015 2:31 PM > To: Open MPI Users > Subject: Re: [OMPI

Re: [OMPI users] machinefile binding error

2015-02-24 Thread Galloway, Jack D
n Behalf Of Ralph Castain Sent: Tuesday, February 24, 2015 1:57 PM To: Open MPI Users Subject: Re: [OMPI users] machinefile binding error Ah, now that’s a “feature” :-) Seriously, it *is* actually a new feature of the 1.8 series. We now go out and actually sense the number of cores on the system and se

Re: [OMPI users] machinefile binding error

2015-02-24 Thread Galloway, Jack D
15 1:57 PM To: Open MPI Users Subject: Re: [OMPI users] machinefile binding error Ah, now that’s a “feature” :-) Seriously, it *is* actually a new feature of the 1.8 series. We now go out and actually sense the number of cores on the system and set the number of slots to that value unless y

Re: [OMPI users] machinefile binding error

2015-02-24 Thread Ralph Castain
Ah, now that’s a “feature” :-) Seriously, it *is* actually a new feature of the 1.8 series. We now go out and actually sense the number of cores on the system and set the number of slots to that value unless you tell us otherwise. It was something people continually nagged us about, and so we m

[OMPI users] machinefile binding error

2015-02-24 Thread Galloway, Jack D
I recently upgraded my CentOS kernel and am running 2.6.32-504.8.1.el6.x86_64, in this upgrade I also decided to upgrade my intel/openmpi codes. I upgraded from: intel version 13.1.2, with openmpi 1.6.5 intel 15.0.2, with openmpi 1.8.4 Previously a command of "mpirun -np NP -machinefile MACH ex