Re: [OMPI users] Trouble using rankfile with gridengine

2010-04-23 Thread Ralph Castain
The slots are numbered 0-3 for a four-slot allocation as shown in your PE_HOSTFILE. Your rankfile contains assignments to slot=4 and slot=5, which are outside your allocation. On Apr 23, 2010, at 10:36 AM, Orion Poplawski wrote: > I'm using gridengine 6.2u5 and openmpi 1.3.3. I'm submitting a

[OMPI users] Trouble using rankfile with gridengine

2010-04-23 Thread Orion Poplawski
I'm using gridengine 6.2u5 and openmpi 1.3.3. I'm submitting a parallel job and would like to specify a rankfile to set processor binding but am getting errors. The $PE_HOSTFILE generated by gridengine is: amos.cora.nwra.com 4 cloud...@amos.cora.nwra.com UNDEFINED andrew.cora.nwra.com 4 cloud...