You should probably also use open MPI's native torque support instead of a
hostile.
Sent from my phone. No type good.
On Jun 30, 2011, at 9:24 PM, "zhuangchao" wrote:
> hello all ,
>
> I submited the following Torque/pbs script.
>
> #PBS -e /tmp/blast_19297.err
> #PBS
That didn't come from OMPI - that error message is from LAM-MPI, which no
longer is supported.
I suggest you check the default path being set by Torque - looks like it is
picking up an old LAM install.
On Jun 30, 2011, at 8:24 PM, zhuangchao wrote:
> hello all ,
>
> I submited the f
hello all ,
I submited the following Torque/pbs script.
#PBS -e /tmp/blast_19297.err
#PBS -o /tmp/blast.output
mpiexec -d -machinefile /tmp/nodes.19297.txt -np 3
/data1/bin/mpiblast -p tblastx -i /data1/cluster/sequences/seq_4.txt -d nt -o
/data1/cluster/blast.ou
