Ralph, attached please find a file with the results of
$ mpirun -d singularity exec ./mpi_test.img /usr/bin/ring
I pressed Ctrl-C at about line 200 of the output file.
I hope there is something useful in it.
My nodefile looks like this
nyx6219
nyx6219
nyx6145
nyx6145
nyx6191
nyx6191
nyx615
If you can send us some more info on how it breaks, that would be helpful. I’ll
file it as an issue so we can track things
Thanks
Ralph
> On Feb 20, 2017, at 9:13 AM, Bennet Fauber wrote:
>
> I got mixed results when bringing a container that doesn't have the IB
> and Torque libraries compile
I got mixed results when bringing a container that doesn't have the IB
and Torque libraries compiled into the OMPI inside the container to a
cluster where it does.
The short summary is that mutlinode communication seems unreliable. I
can mostly get up to 8 procs, two-per-node, to run, but beyond
I -think- that is correct, but you may need the verbs library as well - I
honestly don’t remember if the configury checks for functions in the library or
not. If so, then you’ll need that wherever you build OMPI, but everything else
is accurate
Good luck - and let us know how it goes!
Ralph
>
Ralph.
I will be building from the Master branch at github.com for testing
purposes. We are not 'supporting' Singularity container creation, but
we do hope to be able to offer some guidance, so I think we can
finesse the PMIx version, yes?
That is good to know about the verbs headers being the o
The embedded Singularity support hasn’t made it into the OMPI 2.x release
series yet, though OMPI will still work within a Singularity container anyway.
Compatibility across the container boundary is always a problem, as your
examples illustrate. If the system is using one OMPI version and the c
I am wishing to follow the instructions on the Singularity web site,
http://singularity.lbl.gov/docs-hpc
to test Singularity and OMPI on our cluster. My previously normal
configure for the 1.x series looked like this.
./configure --prefix=/usr/local \
--mandir=${PREFIX}/share/man \
-
