Re: [OMPI users] OpenMPI and SLURM

2013-01-13 Thread Beat Rubischon
Hi Ralph! On 12.01.13 17:29, Ralph Castain wrote: > Sadly, we incorrectly removed the required grpcomm component to make that > work. > Meantime, you can use the PMI support in its place. Success. I used the following options, --with-pmi won't accept a path: ./configure ... --with-pmi CFLAGS="-

Re: [OMPI users] OpenMPI and SLURM

2013-01-12 Thread Ralph Castain
Sadly, we incorrectly removed the required grpcomm component to make that work. I'm restoring it this weekend and we will be issuing a 1.6.4 shortly. Meantime, you can use the PMI support in its place. Just configure OMPI --with-pmi= and you will be able to direct-launch your job. Sorry for th

[OMPI users] OpenMPI and SLURM

2013-01-12 Thread Beat Rubischon
Hello! I'm currently trying to run OpenMPI 1.6.3 binaries directly under SLURM 2.5.1 [1]. OpenMPI is built using --with-slurm, $SLURM_STEP_RESV_PORTS is successfully set by SLURM. According to the error message I assume a shared library couldn't be found, unfortunately I'm not able to find a faile

Re: [OMPI users] OpenMPI and SLURM Confiuration ?

2006-04-21 Thread Jeff Squyres (jsquyres)
21, 2006 12:25 AM > To: us...@open-mpi.org > Subject: Re: [OMPI users] OpenMPI and SLURM Confiuration ? > > >I think that you need to install Open MPI into other machine as well. > >You might want to setup NSF (network file system) for the > master (you are > >say

Re: [OMPI users] OpenMPI and SLURM Confiuration ?

2006-04-21 Thread semper
>I think that you need to install Open MPI into other machine as well. >You might want to setup NSF (network file system) for the master (you are >saying your local machine) so that your slave nodes could see your >mpi executable. > >> bash line 1: orted : command not found > >This error might go a

Re: [OMPI users] OpenMPI and SLURM configuration ??

2006-04-21 Thread Jeff Squyres (jsquyres)
> -Original Message- > From: users-boun...@open-mpi.org > [mailto:users-boun...@open-mpi.org] On Behalf Of semper > Sent: Thursday, April 20, 2006 9:50 PM > To: us...@open-mpi.org > Subject: Re: [OMPI users] OpenMPI and SLURM configuration ?? > > > No, the l

Re: [OMPI users] OpenMPI and SLURM configuration ??

2006-04-20 Thread semper
> No, the location of $HOME should not matter. > > What happens if you "mpirun -np 2 uptime"? (i.e., use mpirun to launch > a non-MPI application) > Thanks. it returns right result! but still only 2 local processes. I tried again to add a hostfile option "--hostfile $HOME/openmpi/bin/host

Re: [OMPI users] OpenMPI and SLURM configuration ?

2006-04-20 Thread Jeff Squyres (jsquyres)
day, April 20, 2006 10:17 AM > To: us...@open-mpi.org > Subject: Re: [OMPI users] OpenMPI and SLURM configuration ? > > >Do you really have a shared /tmp on your cluster ? We do not > copy the > >file on the nodes, they have to be on a shared file system, or at > &

Re: [OMPI users] OpenMPI and SLURM configuration ?

2006-04-20 Thread 杨科
>Do you really have a shared /tmp on your cluster ? We do not copy the >file on the nodes, they have to be on a shared file system, or at >least they have to exist on the same place on all the nodes. > > george. > No,but I put a copy of cpi in the /tmp directory on each node. Because I wonde

Re: [OMPI users] OpenMPI and SLURM configuration ?

2006-04-20 Thread George Bosilca
On Apr 20, 2006, at 9:57 AM, 杨科 wrote: [semper@IA64_node2] srun ¨CN 2 ¨CA [semper@IA64_node2] mpirun -np 2 /tmp/cpi Do you really have a shared /tmp on your cluster ? We do not copy the file on the nodes, they have to be on a shared file system, or at least they have to exist on the sa

[OMPI users] OpenMPI and SLURM configuration ?

2006-04-20 Thread 杨科
Hi,all£¬ recently I've installed OpenMPI on our cluster (4 nodes, each node got one installation), but finally I found it could not work well with the underlying resource management system SLURM. That is,after I typed the following, it seemed mpirun hang there: [semper@IA64_node2] srun ¨CN 2 ¨CA