Re: [OMPI users] OMPI link error with petsc 2.3.3

2008-10-08 Thread Terry Dontje
orry it took so long for me to piece all of this together. I actually mucked with this before about 9 months ago. I guess it was such a traumatic experience that I blanked out the workings :-). --td Date: Wed, 08 Oct 2008 15:58:11 +0200 From: "Yann JOBIC" Subject: Re: [OMPI use

Re: [OMPI users] OMPI link error with petsc 2.3.3

2008-10-08 Thread Yann JOBIC
14:14:50 +0200 From: "Yann JOBIC" Subject: Re: [OMPI users] OMPI link error with petsc 2.3.3 To: Open MPI Users Message-ID: <48eca43a.1060...@polytech.univ-mrs.fr> Content-Type: text/plain; charset=ISO-8859-1; format=flowed Hello, I used cc to compile. I tried to use mpicc/mpi

Re: [OMPI users] OMPI link error with petsc 2.3.3

2008-10-08 Thread Terry Dontje
Oct 2008 14:14:50 +0200 From: "Yann JOBIC" Subject: Re: [OMPI users] OMPI link error with petsc 2.3.3 To: Open MPI Users Message-ID: <48eca43a.1060...@polytech.univ-mrs.fr> Content-Type: text/plain; charset=ISO-8859-1; format=flowed Hello, I used cc to compile. I tried to use

Re: [OMPI users] OMPI link error with petsc 2.3.3

2008-10-08 Thread Yann JOBIC
imilar error as you did when tried to link things with the cc program. If you are using cc to link could you possibly try to use mpif90 to link your code? --td Date: Tue, 07 Oct 2008 16:55:14 +0200 From: "Yann JOBIC" Subject: [OMPI users] OMPI link error with petsc 2.3.3

[OMPI users] OMPI link error with petsc 2.3.3

2008-10-07 Thread Terry Dontje
you did when tried to link things with the cc program. If you are using cc to link could you possibly try to use mpif90 to link your code? --td List-Post: users@lists.open-mpi.org Date: Tue, 07 Oct 2008 16:55:14 +0200 From: "Yann JOBIC" Subject: [OMPI users] OMPI link error with p

Re: [OMPI users] OMPI link error with petsc 2.3.3

2008-10-07 Thread Yann JOBIC
am is running and gives some good results (so far, for some small cases). However i don't know if we'll have some strange behavior in some cases. Yann Date: Tue, 07 Oct 2008 16:55:14 +0200 From: "Yann JOBIC" Subject: [OMPI users] OMPI link error with petsc 2.3.3 To: O

Re: [OMPI users] OMPI link error with petsc 2.3.3

2008-10-07 Thread Terry Dontje
+0200 From: "Yann JOBIC" Subject: [OMPI users] OMPI link error with petsc 2.3.3 To: Open MPI Users Message-ID: <48eb7852.6070...@polytech.univ-mrs.fr> Content-Type: text/plain; charset=ISO-8859-1; format=flowed Hello, I'm using openmpi 1.3r19400 (ClusterTools 8.0), with sun st

Re: [OMPI users] OMPI link error with petsc 2.3.3

2008-10-07 Thread Rolf Vandevaart
This is strange. We need to look into this a little more. However, you may be OK as the warning says it is taking the value from libmpi.so which I believe is the correct one. Does your program run OK? Rolf On 10/07/08 10:57, Doug Reeder wrote: Yann, It looks like somehow the libmpi and

Re: [OMPI users] OMPI link error with petsc 2.3.3

2008-10-07 Thread Doug Reeder
Yann, It looks like somehow the libmpi and libmpi_f90 have different values for the variable mpi_fortran_status_ignore. It sounds like a configure problem. You might check the mpi include files to see if you can see where the different values are coming from. Doug Reeder On Oct 7, 2008, a

[OMPI users] OMPI link error with petsc 2.3.3

2008-10-07 Thread Yann JOBIC
Hello, I'm using openmpi 1.3r19400 (ClusterTools 8.0), with sun studio 12, and solaris 10u5 I've got this error when linking a PETSc code : ld: warning: symbol `mpi_fortran_status_ignore_' has differing sizes: (file /opt/SUNWhpc/HPC8.0/lib/amd64/libmpi.so value=0x8; file /opt/SUNWhpc/H