Re: [OMPI users] Issues on install 1.3.1

2009-04-03 Thread Francesco Pietra
Sorry for such pedestrian misprint. Corrected, the configure ended with error: "Expected file /usr/lib/include/numa.h" In debian amd64 lenny it has a different location: "/usr/include/numa.h" Can the configure script be modified safely to account for the different location? thanks francesco

Re: [OMPI users] Issues on install 1.3.1

2009-04-03 Thread Francesco Pietra
As far as I understand, apt-get install libnuma1 libnuma-dbg libnuma-dev installs libnuma libraries 64 bit in /usr/lib there also two symlinks /usr/lib32 and /usr/lib64 but there is no trace of the libnuma libraries there. That the computational codes I use run twice as fast at 64 bit than 32 bi

Re: [OMPI users] Issues on install 1.3.1

2009-04-02 Thread Iain Bason
On Apr 2, 2009, at 2:45 PM, Gus Correa wrote: Sorry, I don't have an answer about performance. You may need to ask somebody else or google around about the relative performance of 32-bit vs. 64-bit mode. It is worth trying 64-bit. The performance is going to depend on the program. Since 6

Re: [OMPI users] Issues on install 1.3.1

2009-04-02 Thread Gus Correa
Hi Francesco, list I was thinking of compatibility (and consistency) rather than of performance. I don't know about Debian, but on CentOS 5.2 x86_64 the 64-bit libnuma library lives at /usr/lib64, and the 32-bit version on /usr/lib. If you are trying to build 64-bit OpenMPI libraries with libnum

Re: [OMPI users] Issues on install 1.3.1

2009-04-02 Thread Francesco Pietra
Gustavo: Does this imply that a compilation with "--with-libnuma=/usr/lib64" may afford better performance? Am asking that because in the meantime I have taken previous compilation of openmpi-1.2.6 and use it (one disk of raid1 died and I changed both with larger ones). If better performance I can

Re: [OMPI users] Issues on install 1.3.1

2009-04-02 Thread Gus Correa
Hi Francesco, list Francesco: Besides the typo that Jeff found on your CXX definition, I would guess you want --with-libnuma=/usr/lib64 (since your machine is amd64, and you are using the 64-bit Intel compilers: cce, fce). That is instead of --with-libnuma=/usr/lib (32-bit). The /usr/lib64 path a

Re: [OMPI users] Issues on install 1.3.1

2009-04-02 Thread Jeff Squyres
On Apr 2, 2009, at 7:21 AM, Francesco Pietra wrote: Hi: With debian linux amd64 lenny I tried to install openmpi-1.3.1 instead of using the executables openmpi-1.2.6 of previous disks. I configured as for 1.2.6 (wrong ?) CC=/opt/intel/cce/10.1.015/bin/icc CXX=opt/intel/cce/10.1.015/bin/icpc

[OMPI users] Issues on install 1.3.1

2009-04-02 Thread Francesco Pietra
Hi: With debian linux amd64 lenny I tried to install openmpi-1.3.1 instead of using the executables openmpi-1.2.6 of previous disks. I configured as for 1.2.6 (wrong ?) CC=/opt/intel/cce/10.1.015/bin/icc CXX=opt/intel/cce/10.1.015/bin/icpc F77=/opt/intel/fce/10.1.015/bin/ifort FC=/opt/intel/fce/10