Re: [OMPI users] How to prevent linking in GPFS when it is present

2020-03-30 Thread Jonathon A Anderson via users
5746 ~jonathon From: Gabriel, Edgar Sent: Monday, March 30, 2020 3:44 PM To: Open MPI Users Cc: Jonathon A Anderson Subject: RE: [OMPI users] How to prevent linking in GPFS when it is present ompio only added recently support for gpfs, and its only available

Re: [OMPI users] How to prevent linking in GPFS when it is present

2020-03-30 Thread Gabriel, Edgar via users
option for that, but I keep looking. Thanks Edgar -Original Message- From: users On Behalf Of Jonathon A Anderson via users Sent: Monday, March 30, 2020 4:36 PM To: users@lists.open-mpi.org Cc: Jonathon A Anderson Subject: Re: [OMPI users] How to prevent linking in GPFS when it is present

Re: [OMPI users] How to prevent linking in GPFS when it is present

2020-03-30 Thread Jonathon A Anderson via users
users on behalf of Gilles Gouaillardet via users Sent: Sunday, March 29, 2020 6:17 PM To: users@lists.open-mpi.org Cc: Gilles Gouaillardet Subject: Re: [OMPI users] How to prevent linking in GPFS when it is present Jonathon, GPFS is used by both the ROMIO component (that comes from MPICH) and t

Re: [OMPI users] How to prevent linking in GPFS when it is present

2020-03-29 Thread Gilles Gouaillardet via users
Jonathon, GPFS is used by both the ROMIO component (that comes from MPICH) and the fs/gpfs component that is used by ompio (native Open MPI MPI-IO so to speak). you should be able to disable both by running ac_cv_header_gpfs_h=no configure --without-gpfs ... Note that Open MPI is modular

[OMPI users] How to prevent linking in GPFS when it is present

2020-03-29 Thread Jonathon A Anderson via users
We are trying to build Open MPI on a system that happens to have GPFS installed. This appears to cause Open MPI to detect gpfs.h and link against libgpfs.so. We are trying to build a central software stack for use on multiple clusters, some of which do not have GPFS. (It is our experience that t