Re: [OMPI users] Problem using Open MPI 1.10.0 built with Intel compilers 16.0.0

2015-09-30 Thread Fabrice Roy
ook at the configure script and see what's going wrong. On Sep 24, 2015, at 4:51 PM, Fabrice Roy wrote: Hi, I have made some other tests. I don't know if it can help you but here is what I observed. Using the array contructor [] solves the problem for a scalar, as someone wrote on

Re: [OMPI users] Problem using Open MPI 1.10.0 built with Intel compilers 16.0.0

2015-09-24 Thread Fabrice Roy
the mpi_f08 bindings and the Intel 2016 compilers. It looks like configure is choosing to generate a different pragma for Intel 2016 vs. Intel 2015 compilers, and that's causing a problem. Let me look into this a little more... On Sep 24, 2015, at 11:09 AM, Fabrice Roy wrote: Hello,

Re: [OMPI users] Problem using Open MPI 1.10.0 built with Intel compilers 16.0.0

2015-09-24 Thread Fabrice Roy
that your program compiles and runs just fine if you use mpi_f08 module (!) Cheers, Gilles On 9/24/2015 1:00 AM, Fabrice Roy wrote: program testmpi use mpi implicit none integer :: pid integer :: ierr integer :: tok call mpi_init(ierr) call mpi_comm_rank

[OMPI users] Problem using Open MPI 1.10.0 built with Intel compilers 16.0.0

2015-09-23 Thread Fabrice Roy
compilers and both versions of the test code (with tok declared as an integer or as an integer, dimension(1) ) compile and execute. Open MPI was configured with the same options with both compilers. Do you have any idea how I could solve this problem? Thanks, Fabrice Roy -- Fabrice Roy

Re: [OMPI users] MPI_LB in a recursive type

2015-08-28 Thread Roy Stogner
naged to hit on this solution by guesswork, but it's quite a relief to know that its correctness is actually mandated by the MPI standand not just my dumb luck. Thanks again, --- Roy Stogner

[OMPI users] MPI_LB in a recursive type

2015-08-25 Thread Roy Stogner
case I'm seeing failures with both MPICH2 and OpenMPI and so I've got to assume my own code is at fault. Any help would be appreciated. If there's anything I can do to make the issue easier to replicate please let me know. Thanks, --- Roy Stogner#include #include #include &quo

[OMPI users] core dump on MPI_Finalize in child process.

2014-09-01 Thread Roy
Segmentation fault. */ //sleep(2); //un-comment this line to have the sleep, and avoid the core dumps. /* shut down MPI */ MPI_Finalize(); } return 0; } Anyone for the rescue ? Thank you, Roy Avidor

[OMPI users] Compiling 1.6.1 with cygwin 1.7 and gcc

2012-09-24 Thread Roy Hogan
in build option over the last couple of years. I've attached the logs for my "configure" and "make all" steps. Our email filter will not allow me to send zipped files, so I've attached the two log files. I'd appreciate any advice. Thank you, Roy

[OMPI users] Error while compiling openMPI 1.4.2 in Cygwin 1.7.5-1. Library missing?

2010-07-09 Thread Miguel Rubio-Roy
Hi all,   I'm trying to compile openMPI 1.4.2 in Cygwin 1.7.5-1. After ./configure I do make and after some time I always get this error. I've tried "make clean" and "make" again, but that doesn't help. It looks to me like I have all the requirements of the README.Windows file (Cygwin and libtool

Re: [OMPI users] Memory corruption?

2010-01-08 Thread Roy Dragseth
uter Center, University of Tromsø, N-9037 TROMSØ Norway. phone:+47 77 64 41 07, fax:+47 77 64 41 00 Roy Dragseth, Team Leader, High Performance Computing Direct call: +47 77 64 62 56. email: roy.drags...@uit.no

[OMPI users] Memory corruption?

2009-12-22 Thread Roy Dragseth
, University of Tromsø, N-9037 TROMSØ Norway. phone:+47 77 64 41 07, fax:+47 77 64 41 00 Roy Dragseth, Team Leader, High Performance Computing Direct call: +47 77 64 62 56. email: roy.drags...@uit.no

Re: [OMPI users] torque integration when tm ras/plm isn't compiled in.

2009-10-22 Thread Roy Dragseth
g issue though... Regards, r. -- The Computer Center, University of Tromsø, N-9037 TROMSØ Norway. phone:+47 77 64 41 07, fax:+47 77 64 41 00 Roy Dragseth, Team Leader, High Performance Computing Direct call: +47 77 64 62 56. email: roy.drags...@uit.no

[OMPI users] torque integration when tm ras/plm isn't compiled in.

2009-10-22 Thread Roy Dragseth
omatically picks up the PE_NODEFILE if it detects that it is launched within an SGE job. Would it be possible to have the same functionality for torque? The code looks a bit too complex at first sight for me to fix this myself. Best regards, Roy. -- The Computer Center, Univers

Re: [OMPI users] explicit routing for multiple network interfaces

2009-09-14 Thread Jayanta Roy
nly has those 2 devices. (all of the above assume that all your eth0's are > on one subnet, all your eth1's are on another subnet, ...etc.) > > Does that work for you? > > > > On Aug 25, 2009, at 7:14 PM, Jayanta Roy wrote: > > Hi, >> >> I am using

[OMPI users] explicit routing for multiple network interfaces

2009-08-25 Thread Jayanta Roy
Hi, I am using Openmpi (version 1.2.2) for MPI data transfer using non-blocking MPI calls like MPI_Isend, MPI_Irecv etc. I am using "--mca btl_tcp_if_include eth0,eth1" to use both the eth link for data transfer within 48 nodes. Now I have added eth2 and eth3 links on the 32 compute nodes. My aim

Re: [OMPI users] gfortran, gcc4.2, openmpi 1.3.3, fortran compile errors

2009-08-25 Thread Jayanta Roy
Hi, I am using Openmpi (version 1.2.2) for MPI data transfer using non-blocking MPI calls like MPI_Isend, MPI_Irecv etc. I am using "--mca btl_tcp_if_include eth0,eth1" to use both the eth link for data transfer within 48 nodes. Now I have added eth2 and eth3 links on the 32 compute nodes. My aim

Re: [OMPI users] Openmpi 1.3 problems with libtool-ltdl on CentOS 4 and 5

2009-01-30 Thread Roy Dragseth
solve to something in the openmpi libraries and the example runs without crashing. Regards, r. -- The Computer Center, University of Tromsø, N-9037 TROMSØ Norway. phone:+47 77 64 41 07, fax:+47 77 64 41 00 Roy Dragseth, Team Leader, High Performance Computing Direct call: +47 77 64 62 56. email: roy.drags...@uit.no

[OMPI users] Openmpi 1.3 problems with libtool-ltdl on CentOS 4 and 5

2009-01-23 Thread Roy Dragseth
ø, N-9037 TROMSØ Norway. phone:+47 77 64 41 07, fax:+47 77 64 41 00 Roy Dragseth, Team Leader, High Performance Computing Direct call: +47 77 64 62 56. email: roy.drags...@uit.no

[OMPI users] openmpi-1.2.2 installation

2007-06-03 Thread Jayanta Roy
Hi, I was trying to install openmpi-1.2.2 under 2.4.32 kernel. ./configure --prefix=/mnt/shared/jroy/openmpi-1.2.2/ CC=icc CXX=icpc F77=ifort FC=ifort make all install It installed successfully, but during mpirun I got... mpirun --mca btl_tcp_if_include eth0 -n 4 -bynode -hostfile test_nodes .

Re: [OMPI users] multiple MPI_Reduce

2007-05-15 Thread Jayanta Roy
Dear Rainer and Adrian, Thank you lot for the help. It works. I was trying this for long time but didn't notice the mistakes. I can't understand how can I overlooked that! Regards, Jayanta On 5/15/07, Adrian Knoth wrote: On Mon, May 14, 2007 at 11:59:18PM +0530, Jayanta Roy wr

[OMPI users] multiple MPI_Reduce

2007-05-14 Thread Jayanta Roy
Hi, In my 4 nodes cluster I want to run two MPI_Reduce on two communicators (one using Node1, Node2 and other using Node3, Node4). Now to create communicator I used ... MPI_Comm MPI_COMM_G1, MPI_COMM_G2; MPI_Group g0, g1, g2; MPI_Comm_group(MPI_COMM_WORLD,&g0); MPI_Group_incl(g0,g_size,&r_array[0

[OMPI users] jumbo frame can create deallock?

2006-12-26 Thread Jayanta Roy
Hi, To optimize our network throughput we set jumbo frame=8000. The transfers are going smoothly. But after few minitues we are seeing drastic drop in network throughput, looks like a problem of deadlock in network transfer speed (slow down by a factor of 100!). This situation is not happening if

Re: [OMPI users] dual Gigabit ethernet support

2006-10-23 Thread Jayanta Roy
ct 23, 2006, at 4:56 AM, Jayanta Roy wrote: Hi, Sometime before I have posted doubts about using dual gigabit support fully. See I get ~140MB/s full duplex transfer rate in each of following runs. mpirun --mca btl_tcp_if_include eth0 -n 4 -bynode -hostfile host a.out mpirun --mca btl_tcp_

Re: [OMPI users] dual Gigabit ethernet support

2006-10-23 Thread Jayanta Roy
w routines in ipv4 processing and recompile the Kernel, if you are familiar with Kernel building and your OS is Linux. On 10/23/06, Jayanta Roy wrote: Hi, Sometime before I have posted doubts about using dual gigabit support fully. See I get ~140MB/s full duplex transfer rate in each of foll

[OMPI users] dual Gigabit ethernet support

2006-10-23 Thread Jayanta Roy
Hi, Sometime before I have posted doubts about using dual gigabit support fully. See I get ~140MB/s full duplex transfer rate in each of following runs. mpirun --mca btl_tcp_if_include eth0 -n 4 -bynode -hostfile host a.out mpirun --mca btl_tcp_if_include eth1 -n 4 -bynode -hostfile host

[OMPI users] problem with running mpi

2006-09-13 Thread Jayanta Roy
Hi, I was running mpirun in the linux cluster we have. mpirun -n 5 -bynode -hostfile test_nodes a.out Sometime occationaly after MPI initialization I have the following error.. rank: 1 of: 5 rank: 4 of: 5 rank: 3 of: 5 rank: 0 of: 5 rank: 2

Re: [OMPI users] dual Gigabit ethernet support

2006-08-22 Thread Jayanta Roy
ou are going to be limited, also memory bandwidth could also be the bottleneck. Thanks, Galen Jayanta Roy wrote: Hi, In between two nodes I have dual Gigabit ethernet full duplex links. I was doing benchmarking using non-blocking MPI send and receive. But I am getting only speed corresponds

[OMPI users] dual Gigabit ethernet support

2006-08-22 Thread Jayanta Roy
the ports, then why I am not getting full throughput from dual Gigabit ethernet ports? Can anyone please help me in this? Regards, Jayanta Jayanta Roy National Centre for Radio Astrophysics | Phone : +91-20-25697107 T