On 23 March 2017 at 17:39, Vinay Mittal wrote:
> I need mpirun to run a genome assembler.
>
> Linux installation of openmpi-2.1.0 stops during make all saying:
>
> "Perl 5.006 required--this is only version 5.00503, stopped at
> /usr/share/perl5/vars.pm line 3."
This looks like Perl's own verific
On 12/03/07, Ralph Castain wrote:
I have been asked about providing native LSF support and hope to get to that
in the not-too-distant future, but have no access to an LSF machine to
verify operation (I may have a cooperative user, though, who will test for
me - I would welcome another!).
Hi Ra
On 12/20/06, Harakiri wrote:
I will study through the suggested paper, however
i actually read a different paper which suggested
using less messages, i would imagine that for arrays
of numbers lets say 100 Millions - the network
messages become the critical factor.
IMHO,
It depends completely
On 9/22/06, Nuno Sucena Almeida wrote:
And yesterday it was accepted to be part of Boost itself!
Nice! Now it only need to be 100% MPI-1 and 2 compliant... ;)
--renato
More than a week old news but didn't see anyone commenting on that:
http://www.generic-programming.org/~dgregor/boost.mpi/libs/parallel/doc/html/
The page says it was tested with LAM, Open and MPICH but the
functionality is still limited.
I liked *very* much the way they transformed MPI into pl
On 9/15/06, imran shaik wrote:
Where can i get MPI::Simple??
$ cpan
cpan> install Parallel::MPI::Simple
you can try other MPI implementations but I guess mpich is the only
one that will work...
cheers,
--renato
On 9/13/06, imran shaik wrote:
I need to run parallel jobs on a cluster typically of size 600 nodes and
running SGE, but the programmers are good at perl but not C or C++. So i
thought of MPI, but i dont know whether it has perl support?
Hi Imran,
SGE will dispatch process among the nodes of
On 9/12/06, Aidaros Dev wrote:
Hi all,
Im using cluster and mpich in Redhat.
When i printf MPI_Wtime value, it return such like 0.224554 or 0.755654,
even sometime return 0.0.
I check my system time
$date
Tue Sep 12 15:15:16 MYT 2006 , means system time is ok.
Any idea?
MPI_Wtime sho
Hi Devel list, crossposting as this is getting weird...
Alfonso did a client/server using MPI_Publish_name / MPI_Lookup_name
and it runs fine on both MPICH2 and LAM-MPI but fail on Open MPI. It's
not a simple failure (ie. returning an error code) it breaks the
execution line and quits. The server
On 9/7/06, Eng. A.A. Isola wrote:
For the other
discussion...I have used only the MPI2 rouines inside my programs and
nothinf other. Then is not possible that it doesn't works. I can
understand, for example, that inside Open_MPI the threads or the
Client-
Server routines are realized in differen
Hi Alfonso,
I couldn't even compile your code directly, is it the one you're using
? It does not even makes sense... can you send the code you are using,
or at least a working portion of it that contains
MPI_LOOKUP_NAME with which we can reproduce your error ?
I have the
same problem also if I
On 9/7/06, Eng. A.A. Isola wrote:
hy it is not possible to use the "The MPI Extensions" (yellow book)
Client-Server example?!?!?!?
Hi, I don't have this book, can you point us the code, pls ?
In MPICH2 this example works properly.
It was probably designed to MPICH2, I wouldn't expect ever
On 9/7/06, Paul Fons wrote:
I would be happy if I could just solve this problem, but I do have
another (more complicated) question. Soon I will have yet another
remote machine (a new "woodcrest" quad core macintosh) to connect
to. The two remote machines have two NICs. Routine communications
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