Re: [OMPI users] scheduling to real cores, not using hyperthreading (openmpi-2.1.0)

2017-04-24 Thread Heinz-Ado Arnolds
ad that option solved the problem. We’ll > have to look at that configure option - shouldn’t be too hard. > > As for the mapping you requested - no problem! Here’s the cmd line: > > mpirun --map-by ppr:1:core --bind-to hwthread > > Ralph > >> On Apr 19, 2017, at 2:51

Re: [OMPI users] scheduling to real cores, not using hyperthreading (openmpi-2.1.0)

2017-04-13 Thread Heinz-Ado Arnolds
t; As I said earlier in this thread, we are actively working with the OpenMP > folks on a mechanism by which the two sides can coordinate these actions so > it will be easier to get the desired behavior. For now, though, hopefully > this will suffice. > >> On Apr 13, 2017

Re: [OMPI users] scheduling to real cores, not using hyperthreading (openmpi-2.1.0)

2017-04-13 Thread Heinz-Ado Arnolds
On 13.04.2017 15:20, gil...@rist.or.jp wrote: ... > in your second case, there are 2 things > - MPI binds to socket, that is why two MPI tasks are assigned the same > hyperthreads > - the GNU OpenMP runtime looks unable to figure out 2 processes use the > same cores, and hence end up binding >

Re: [OMPI users] scheduling to real cores, not using hyperthreading (openmpi-2.1.0)

2017-04-13 Thread Heinz-Ado Arnolds
> propagated > > can you try > > mpirun -x OMP_PROC_BIND ... > > and see if it helps ? > > > Cheers, > > > On 4/13/2017 12:23 AM, Heinz-Ado Arnolds wrote: >> Dear Gilles, >> >> thanks for your answer. >> >> - compiler: gcc

Re: [OMPI users] scheduling to real cores, not using hyperthreading (openmpi-2.1.0)

2017-04-12 Thread Heinz-Ado Arnolds
ould not worry about them migrating between hyperthreads from the same > core. > > Cheers, > > Gilles > > On Wednesday, April 12, 2017, Heinz-Ado Arnolds <mailto:arno...@mpa-garching.mpg.de>> wrote: > > Dear rhc, > > to make it more clear what I

Re: [OMPI users] scheduling to real cores, not using hyperthreading (openmpi-2.1.0)

2017-04-12 Thread Heinz-Ado Arnolds
can override that by > adding "-bind-to core" to your cmd line if that is what you desire. > > If you want to use individual HTs as independent processors, then > “--use-hwthread-cpus -bind-to hwthreads” would indeed be the right > combination. > >>

[OMPI users] scheduling to real cores, not using hyperthreading (openmpi-2.1.0)

2017-04-10 Thread Heinz-Ado Arnolds
d-cpus, --bind-to hwthreads, but didn't find the right combination. Would be great to get any hints? Thank a lot in advance, Heinz-Ado Arnolds ___ users mailing list users@lists.open-mpi.org https://rfd.newmexicoconsortium.org/mailman/listinfo/users

Re: [OMPI users] OpenMPI-2.1.0 problem with executing orted when using SGE

2017-03-27 Thread Heinz-Ado Arnolds
-mpi/ompi/pull/3163 > > >> On Mar 22, 2017, at 7:49 AM, Reuti > <mailto:re...@staff.uni-marburg.de>> wrote: >> >>> >>> Am 22.03.2017 um 15:31 schrieb Heinz-Ado Arnolds >>> mailto:arno...@mpa-garching.mpg.de>>: >>> >>&g

Re: [OMPI users] OpenMPI-2.1.0 problem with executing orted when using SGE

2017-03-22 Thread Heinz-Ado Arnolds
of a way to revert to the old style (e.g. configure option)? Otherwise all my users have to add this option. Thanks again, and have a nice day Ado Arnolds On 22.03.2017 13:58, Reuti wrote: > Hi, > >> Am 22.03.2017 um 10:44 schrieb Heinz-Ado Arnolds >> : >> >> Dear

[OMPI users] OpenMPI-2.1.0 problem with executing orted when using SGE

2017-03-22 Thread Heinz-Ado Arnolds
way to revert the 2.1.0 behavior to the 1.10.6 (use SGE/qrsh) one? Are there mca params to set this? If you need more info, please let me know. (Job submitting machine and target cluster are the same with all tests. SW is residing in AFS directories visible on all machines