Re: [OMPI users] How to keep multiple installations at same time

2014-08-05 Thread David Turner
s Link to this post: http://www.open-mpi.org/community/lists/users/2014/08/24921.php -- Best regards, David Turner User Services Groupemail: dptur...@lbl.gov NERSC Division phone: (510) 486-4027 Lawrence Berkeley Labfax: (510) 486-4316

[OMPI users] current release?

2013-03-13 Thread David Turner
Hi, On Feb 21, Jeff Squyres announced Open MPI 1.6.4. However, on the Open MPI home page, 1.6.3 is still indicated as the current release. Going to the download page shows 1.6.4 as the current release, so I think the problem is isolated to the home page. Thanks! -- Best regards, David

[OMPI users] limiting tasks/ranks

2012-11-01 Thread David Turner
vailable. I've just quickly scanned the MCA parameters: ompi_info --param all all and couldn't find the answer to my question. Thanks! -- Best regards, David Turner User Services Groupemail: dptur...@lbl.gov NERSC Division phone: (510) 486-4027 Lawrence Berkeley

Re: [OMPI users] problems with 1.6

2012-05-15 Thread David Turner
Hi Ralph, Sorry for the false alarm, and thanks for the tip: ... version confusion where the mpirun being used doesn't match the backend daemons. Yes, my test environment was wonky. All is well now. On May 14, 2012, at 3:41 PM, David Turner wrote: ... [c0667:24962] [[39579,

[OMPI users] problems with 1.6

2012-05-14 Thread David Turner
INIT failed for some reason; ... I can provide additional details if needed, but again: I did nothing different than what I have done with previous OMPI and compiler releases. Thoughts? Thanks! -- Best regards, David Turner User Services Groupemail: dptur...@lbl.gov NERSC Division

[OMPI users] open-mpi.org site

2012-05-07 Thread David Turner
Hi all, Currently getting "You don't have permission to access / on this server" on the www.open-mpi-org website. -- Best regards, David Turner User Services Groupemail: dptur...@lbl.gov NERSC Division phone: (510) 486-4027 Lawrence Berkeley Labfax: (510) 486-4316

Re: [OMPI users] UC EXTERNAL: Re: How to set up state-less node /tmpfor OpenMPI usage

2011-11-04 Thread David Turner
egory? Or the "shared memory" category? Or the "troubleshooting" category? Thanks -Original Message- From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On Behalf Of David Turner Sent: Friday, November 04, 2011 1:38 AM To: Open MPI Users Subject: Re: [OMPI use

Re: [OMPI users] EXTERNAL: Re: How to set up state-less node /tmp for OpenMPI usage

2011-11-04 Thread David Turner
11 2:37 AM, David Turner wrote: % df /tmp Filesystem 1K-blocks Used Available Use% Mounted on - 12330084 822848 11507236 7% / % df / Filesystem 1K-blocks Used Available Use% Mounted on - 12330084 822848 11507236 7% / That works out to 11GB. But... The compute nodes have 24GB. Freshly booted, abou

Re: [OMPI users] EXTERNAL: Re: How to set up state-less node /tmp for OpenMPI usage

2011-11-04 Thread David Turner
very much, exactly what I wanted to hear. How big is /tmp? -Original Message- From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On Behalf Of David Turner Sent: Thursday, November 03, 2011 6:36 PM To: us...@open-mpi.org Subject: Re: [OMPI users] EXTERNAL: Re: How to set up

Re: [OMPI users] EXTERNAL: Re: How to set up state-less node /tmp for OpenMPI usage

2011-11-03 Thread David Turner
___ users mailing list us...@open-mpi.org http://www.open-mpi.org/mailman/listinfo.cgi/users -- Best regards, David Turner User Services Groupemail: dptur...@lbl.gov NERSC Division phone: (510) 486-4027 Lawrence Berkeley Labfax: (510) 486-4316

[OMPI users] Displaying MAIN in Totalview

2011-03-21 Thread David Turner
that thread, and didn't see any update, so I passed on the info myself. -- -- Best regards, David Turner User Services Groupemail: dptur...@lbl.gov NERSC Division phone: (510) 486-4027 Lawrence Berk

Re: [OMPI users] memory limits on remote nodes

2010-10-12 Thread David Turner
of Open MPI! -- Best regards, David Turner User Services Groupemail: dptur...@lbl.gov NERSC Division phone: (510) 486-4027 Lawrence Berkeley Labfax: (510) 486-4316

Re: [OMPI users] memory limits on remote nodes

2010-10-07 Thread David Turner
ted by orted, and therefore inherit its limits. Is there any sort of orted configuration that can help here? Any other thoughts about how to approach this? Thanks! -- Best regards, David Turner User Services Groupemail: dptur...@lbl.gov NERSC Division phone: (510) 486-40

[OMPI users] memory limits on remote nodes

2010-10-06 Thread David Turner
sses are started by orted, and therefore inherit its limits. Is there any sort of orted configuration that can help here? Any other thoughts about how to approach this? Thanks! -- Best regards, David Turner User Services Groupemail: dptur...@lbl.gov NERSC Division phone: (510)

Re: [OMPI users] location of ompi libraries

2010-10-05 Thread David Turner
likely that you compiled Open MPI with --enable-static and/or --disable-dlopen. In this case, all of Open MPI's plugins are slurped up into the libraries themselves (e.g., libmpi.so or libmpi.a). That's why everything continues to work properly. On Oct 4, 2010, at 6:58 PM, David Tur

[OMPI users] location of ompi libraries

2010-10-04 Thread David Turner
for mca_btl_openib.so, to no avail. And yet, 1.4.2 seems to work "fine". Is my installation broken, or is the organization significantly different between the two versions? A quick scan of the release notes didn't help. Thanks! -- Best regards, David Turner User Services Gro

[OMPI users] compiler upgrades require openmpi rebuild?

2010-08-30 Thread David Turner
ng Open MPI with PGI 10.8, is there any (safe, reliable) way to get the compiler wrappers to link against the PGI 10.8 libraries? Thanks! -- Best regards, David Turner User Services Groupemail: dptur...@lbl.gov NERSC Division phone: (510) 486-4027 Lawrence Berkeley Labfax: (510) 486-4316

Re: [OMPI users] problem with -npernode

2010-06-18 Thread David Turner
50 PM, David Turner wrote: Hi, Recently, Christopher Maestas reported a problem with -npernode in Open MPI 1.4.2 ("running a ompi 1.4.2 job with -np versus -npernode"). I have also encountered this problem, with a simple "hello, world" program: % mpirun -np 16 ./a.out myran

[OMPI users] problem with -npernode

2010-06-17 Thread David Turner
eed more information. Thanks! -- Best regards, David Turner User Services Groupemail: dptur...@lbl.gov NERSC Division phone: (510) 486-4027 Lawrence Berkeley Labfax: (510) 486-4316

[OMPI users] Threading models with openib

2010-06-08 Thread David Turner
Hi all, Please verify: if using openib BTL, the only threading model is MPI_THREAD_SINGLE? Is there a timeline for full support of MPI_THREAD_MULTIPLE in Open MPI's openib BTL? Thanks! -- Best regards, David Turner User Services Groupemail: dptur...@lbl.gov NERSC Div

Re: [OMPI users] excluding hosts

2010-04-06 Thread David Turner
s. The above option would prevent that, correct? Does that solve the problem? I'll give it a try and let you know. Thanks! Ralph On Apr 6, 2010, at 3:28 PM, David Turner wrote: Hi, Our cluster has a handful of login nodes, and then a bunch of compute nodes. OpenMPI is installed in a g

[OMPI users] excluding hosts

2010-04-06 Thread David Turner
e a way to explicitly exclude hosts from consideration for mpirun? To prevent (what is usually accidental) running MPI apps on our login nodes? Thanks! -- Best regards, David Turner User Services Groupemail: dptur...@lbl.gov NERSC Division phone: (510) 486-4027 Lawrence Berkeley Lab

[OMPI users] IPoIB

2010-04-05 Thread David Turner
it matters, resource allocation is via torque. Thanks! -- Best regards, David Turner User Services Groupemail: dptur...@lbl.gov NERSC Division phone: (510) 486-4027 Lawrence Berkeley Labfax: (510) 486-4316

Re: [OMPI users] Questions on /tmp/openmpi-sessions-userid directory

2010-03-07 Thread David Turner
Hi Ralph > ... that is fixed in the upcoming 1.4.2 release. Can you say when this release will be generally available? Proliferating session directories are a problem for us too. -- Best regards, David Turner User Services Groupemail: dptur...@lbl.gov NERSC Division ph

Re: [OMPI users] sm btl choices

2010-03-01 Thread David Turner
olks there and get a copy of their epilog script. On Mar 1, 2010, at 1:42 AM, David Turner wrote: Hi all, Running on a large cluster of 8-core nodes. I understand that the SM BTL is a "good thing". But I'm curious about its use of memory-mapped files. I believe these files w

Re: [OMPI users] sm btl choices

2010-03-01 Thread David Turner
es and epilogues, just haven't implemented them yet. Even if I can find and fix a reason why OMPI is currently not doing this, we will probably do it an epilogue anyway. Thanks for your help! On Mar 1, 2010, at 1:42 AM, David Turner wrote: Hi all, Running on a large cluster of 8-core nodes.

[OMPI users] sm btl choices

2010-03-01 Thread David Turner
BTL even within a node? Of course, the "self" BTL should still be used if appropriate. Any thoughts clarifying these issues would be greatly appreciated. Thanks! -- Best regards, David Turner User Services Groupemail: dptur...@lbl.gov NERSC Division phone: (510) 48

[OMPI users] which ofed rpms for openmpi

2010-01-23 Thread David Turner
.ofed1.4.2.x86_64.rpm tgt-0.1-20080828.x86_64.rpm tgt-generic-debuginfo-0.1-20080828.x86_64.rpm tvflash-0.9.0-1.ofed1.4.2.x86_64.rpm tvflash-debuginfo-0.9.0-1.ofed1.4.2.x86_64.rpm Thanks! -- Best regards, David Turner User Services Groupemail: dptur...@lbl.gov NERSC Division phone

Re: [OMPI users] Problem building OpenMPI with PGI compilers

2009-12-11 Thread David Turner
get everything about autogen.sh and just apply the attached patch. Thanks; I was able to complete the make process using the provided patch. -- Best regards, David Turner User Services Groupemail: dptur...@lbl.gov NERSC Division phone: (510) 486-4027 Lawrence Berkeley Labfax: (510) 486-4316

[OMPI users] Problem building OpenMPI with PGI compilers

2009-12-09 Thread David Turner
me error! Any suggestions? Let me know if I should provide full copies of the configure and make output. Thanks! -- Best regards, David Turner User Services Groupemail: dptur...@lbl.gov NERSC Division phone: (510) 486-4027 Lawrence Berkeley Labfax: (510) 486-4316