Re: [OMPI users] Segmentation fault

2023-08-09 Thread Aziz Ogutlu via users
sing Open MPI v4.0.3, which is fairly old.  Many bug fixes have been released since that version.  Can you upgrade to the latest version of Open MPI (v4.1.5)? *From:* users <mailto:users-boun...@lists.open-mpi.org> on

Re: [OMPI users] Segmentation fault

2023-08-09 Thread Aziz Ogutlu via users
ou upgrade to the latest version of Open MPI (v4.1.5)? *From:* users on behalf of Aziz Ogutlu via users *Sent:* Wednesday, August 9, 2023 3:26 AM *To:* Open MPI Users *Cc:* Aziz Ogutlu *Subject:* [OMPI users] Segmenta

[OMPI users] Segmentation fault

2023-08-09 Thread Aziz Ogutlu via users
Hi there all, We're using SU2 with OpenMPI 4.0.3, gcc 8.5.0 on Redhat 7.9. We compiled all component for using on HPC system. When I use SU2 with QuickStart config file with OpenMPI, it gives error like in attached file. Command is: |mpirun -np 8 --allow-run-as-root SU2_CFD inv_NACA0012.cfg|

Re: [OMPI users] [EXTERNAL] Re: MPI_Init_thread error

2023-07-26 Thread Aziz Ogutlu via users
Hi John, We're using software on HPC system, because of that I have to compile it from zero. On 7/26/23 17:16, John Hearns wrote: Another idiot question... Is there a Pack or Easy build recipe for this software? Should help you get it built. On Wed, 26 Jul 2023, 10:27 Aziz Ogutlu via

Re: [OMPI users] [EXTERNAL] Re: MPI_Init_thread error

2023-07-26 Thread Aziz Ogutlu via users
--mpi=pmi2 ... Cheers, Gilles On Tue, Jul 25, 2023 at 5:07 PM Aziz Ogutlu via users wrote: Hi there all, We're using Slurm 21.08 on Redhat 7.9 HPC cluster with OpenMPI 4.0.3 + gcc 8.5.0. When we run command below for call SU2, we get an error me

Re: [OMPI users] [EXTERNAL] Re: MPI_Init_thread error

2023-07-26 Thread Aziz Ogutlu via users
u *Subject: *Re: [EXTERNAL] Re: [OMPI users] MPI_Init_thread error HI Aziz, Did you include –with-pmi2 on your Open MPI configure line? Howard *From: *users on behalf of Aziz Ogutlu via users *Organization: *Eduline Bilisim *Reply-To: *Open MPI Users *Dat

Re: [OMPI users] [EXTERNAL] Re: MPI_Init_thread error

2023-07-26 Thread Aziz Ogutlu via users
Cheers, Gilles On Tue, Jul 25, 2023 at 5:07 PM Aziz Ogutlu via users wrote: Hi there all, We're using Slurm 21.08 on Redhat 7.9 HPC cluster with OpenMPI 4.0.3 + gcc 8.5.0. When we run command below for call SU2, we get an error message:

Re: [OMPI users] MPI_Init_thread error

2023-07-25 Thread Aziz Ogutlu via users
, you need to make sure Open MPI was built with SLURM support (e.g. configure --with-slurm ...) and then srun --mpi=pmi2 ... Cheers, Gilles On Tue, Jul 25, 2023 at 5:07 PM Aziz Ogutlu via users wrote: Hi there all, We're using Slurm 21.08 on Redhat 7.9 HPC cluster with Op

[OMPI users] MPI_Init_thread error

2023-07-25 Thread Aziz Ogutlu via users
Hi there all, We're using Slurm 21.08 on Redhat 7.9 HPC cluster with OpenMPI 4.0.3 + gcc 8.5.0. When we run command below for call SU2, we get an error message: /$ srun -p defq --nodes=1 --ntasks-per-node=1 --time=01:00:00 --pty bash -i/ /$ module load su2/7.5.1/ /$ SU2_CFD config.cfg/ /*** An

[OMPI users] MPI_Init_thread error

2023-07-25 Thread Aziz Ogutlu via users
Hi there all, We're using Slurm 21.08 on Redhat 7.9 HPC cluster with OpenMPI 4.0.3 + gcc 8.5.0. When we run command below for call SU2, we get an error message: /$ srun -p defq --nodes=1 --ntasks-per-node=1 --time=01:00:00 --pty bash -i/ /$ module load su2/7.5.1/ /$ SU2_CFD config.cfg/ /*** An