Re: [OMPI users] mpirun: symbol lookup error: /usr/local/lib/openmpi/mca_plm_lsf.so: undefined symbol: ls b_init

2009-04-08 Thread Alessandro Surace
libpthread.so.0 => /lib/i686/nosegneg/libpthread.so.0 (0x00c2f000) libc.so.6 => /lib/i686/nosegneg/libc.so.6 (0x00ab8000) /lib/ld-linux.so.2 (0x00a95000) On Mon, Apr 6, 2009 at 10:02 PM, Prentice Bisbal wrote: > Alessandro Surace wrote: > > Hi guys, I t

[OMPI users] mpirun: symbol lookup error: /usr/local/lib/openmpi/mca_plm_lsf.so: undefined symbol: ls b_init

2009-04-01 Thread Alessandro Surace
Hi guys, I try to repost my question... I've a problem with the last stable build and the last nightly snapshot. When I run a job directly with mpirun no problem. If I try to submit it with lsf: bsub -a openmpi -m grid01 mpirun.lsf /mnt/ewd/mpi/fibonacci/fibonacci_mpi I get the follow error: mpir

Re: [OMPI users] [OMPI devel] mpirun: symbol lookup error:/usr/local/lib/openmpi/mca_plm_lsf.so: undefined symbol: ls b_init

2009-03-31 Thread Alessandro Surace
Hi Jeff, Yes I've installed LSF and the liblsf and libbat are found by the configure how you can see in the previous attach and here: /opt/lsf/7.0/linux2.6-glibc2.3-x86/lib -rw-r--r-- 1 root 10007 1771182 Sep 24 2008 libbat.a -rw-r--r-- 1 root 10007 31278 Nov 23 2007 libbat.jsdl.a -rwxr-xr-x 1

[OMPI users] mpirun: symbol lookup error: /usr/local/lib/openmpi/mca_plm_lsf.so: undefined symbol: ls b_init

2009-03-30 Thread Alessandro Surace
Hi guys, I've a problem with the last stable build and the last nightly snapshot. When I run a job directly with mpirun no problem. If I try to submit it with lsf: bsub -a openmpi -m grid01 mpirun.lsf /mnt/ewd/mpi/fibonacci/fibonacci_mpi I get the follow error: mpirun: symbol lookup error: /usr/l

Re: [OMPI users] PML add procs failed --> Returned "Unreachable" (-12) instead of "Success" (0)

2009-03-30 Thread Alessandro Surace
Updated link: http://itss.it/depot/openmpi/ Alex On Mon, Mar 30, 2009 at 2:52 PM, Alessandro Surace wrote: > Hi Ralph and all, > I've find that this question is a known bug > https://svn.open-mpi.org/trac/ompi/ticket/972 . > > This bug is resolved in version 1.3.1. > I

Re: [OMPI users] PML add procs failed --> Returned "Unreachable" (-12) instead of "Success" (0)

2009-03-30 Thread Alessandro Surace
Hi Ralph and all, I've find that this question is a known bug https://svn.open-mpi.org/trac/ompi/ticket/972 . This bug is resolved in version 1.3.1. I've created the BIN RPM without the known issue with -D_FORTIFY_SOURCE=2. You can DL the bin RPM at: http://www.itss.it/public_ftp/openmpi/openmpi-

Re: [OMPI users] PML add procs failed --> Returned "Unreachable" (-12) instead of "Success" (0)

2009-03-27 Thread Alessandro Surace
is about reachable because I can trace the network traffic and see that grid03 and grid04 communicates when I run the job. Alex On Mar 26, 2009, at 10:59 AM, Alessandro Surace wrote: > Hi Ralph, > what do you mean to create/define a directly interface? > > The 3 hosts are network con

Re: [OMPI users] PML add procs failed --> Returned "Unreachable" (-12) instead of "Success" (0)

2009-03-26 Thread Alessandro Surace
Hi Ralph, what do you mean to create/define a directly interface? The 3 hosts are network connected and ssh pub key enabled. Every hosts can see the other but they are not all on the same direct connected network . More in detail: grid01 and grid04 are in the same network grid03 is on different ne

[OMPI users] PML add procs failed --> Returned "Unreachable" (-12) instead of "Success" (0)

2009-03-26 Thread Alessandro Surace
Hi Guys, I'm really new in mpi. I've created a small grid composed of virtual and real host. grid01 real/Centos/(Open MPI) 1.2.5 grid03 virtual (xen)/Centos/(Open MPI) 1.2.5 grid04 virtual (vmware)/Centos/(Open MPI) 1.2.5 When I try to run a parallel job like this: mpirun -v -H grid01,grid04 -np