Re: [OMPI users] topology.c line 940?

2020-03-29 Thread Brice Goglin via users
Hello This is hwloc (the hardware detection tool) complaining that something is wrong in your hardware or operating system. It won't prevent your MPI code from working, however process binding may not be optimal. You may want to upgrade your operating system kernel and/or BIOS. If you want to deb

[OMPI users] topology.c line 940?

2020-03-29 Thread Chen Chieh 陳婕 via users
Dear support, When I use FLUENT with UDF. After initializing, it’ll appear below information. However I change all UDF option into constant, it still appear the same message. Where could I know about topology.c line 940? 99: mpt_accept: error: accept failed: Invalid argument 99: mpt_accep

Re: [OMPI users] How to prevent linking in GPFS when it is present

2020-03-29 Thread Gilles Gouaillardet via users
Jonathon, GPFS is used by both the ROMIO component (that comes from MPICH) and the fs/gpfs component that is used by ompio (native Open MPI MPI-IO so to speak). you should be able to disable both by running ac_cv_header_gpfs_h=no configure --without-gpfs ... Note that Open MPI is modular

[OMPI users] How to prevent linking in GPFS when it is present

2020-03-29 Thread Jonathon A Anderson via users
We are trying to build Open MPI on a system that happens to have GPFS installed. This appears to cause Open MPI to detect gpfs.h and link against libgpfs.so. We are trying to build a central software stack for use on multiple clusters, some of which do not have GPFS. (It is our experience that t