Re: [OMPI users] Memory Leak in 3.1.2 + UCX

2018-10-05 Thread Gilles Gouaillardet
Charles, are you saying that even if you mpirun --mca pml ob1 ... (e.g. force the ob1 component of the pml framework) the memory leak is still present ? As a side note, we strongly recommend to avoid configure --with-FOO=/usr instead configure --with-FOO should be used (otherwise you will end u

Re: [OMPI users] Memory Leak in 3.1.2 + UCX

2018-10-05 Thread Pavel Shamis
Posting this on UCX list. On Thu, Oct 4, 2018 at 4:42 PM Charles A Taylor wrote: > > We are seeing a gaping memory leak when running OpenMPI 3.1.x (or 2.1.2, > for that matter) built with UCX support. The leak shows up > whether the “ucx” PML is specified for the run or not. The applications

Re: [OMPI users] ompio on Lustre

2018-10-05 Thread Dave Love
"Gabriel, Edgar" writes: > It was originally for performance reasons, but this should be fixed at > this point. I am not aware of correctness problems. > > However, let me try to clarify your question about: What do you > precisely mean by "MPI I/O on Lustre mounts without flock"? Was the > Lustr

Re: [OMPI users] opal_pmix_base_select failed for master and 4.0.0

2018-10-05 Thread Jeff Squyres (jsquyres) via users
Oops! We had a typo in yesterday's fix -- fixed: https://github.com/open-mpi/ompi/pull/5847 Ralph also put double extra super protection to make triple sure that this error can't happen again in: https://github.com/open-mpi/ompi/pull/5846 Both of these should be in tonight's nightly s

Re: [OMPI users] ompio on Lustre

2018-10-05 Thread Gabriel, Edgar
It was originally for performance reasons, but this should be fixed at this point. I am not aware of correctness problems. However, let me try to clarify your question about: What do you precisely mean by "MPI I/O on Lustre mounts without flock"? Was the Lustre filesystem mounted without flock?

[OMPI users] ompio on Lustre

2018-10-05 Thread Dave Love
Is romio preferred over ompio on Lustre for performance or correctness? If it's relevant, the context is MPI-IO on Lustre mounts without flock, which ompio doesn't seem to require. Thanks. ___ users mailing list users@lists.open-mpi.org https://lists.open

Re: [OMPI users] opal_pmix_base_select failed for master and 4.0.0

2018-10-05 Thread Ralph H Castain
Please send Jeff and I the opal/mca/pmix/pmix4x/pmix/config.log again - we’ll need to see why it isn’t building. The patch definitely is not in the v4.0 branch, but it should have been in master. > On Oct 5, 2018, at 2:04 AM, Siegmar Gross > wrote: > > Hi Ralph, hi Jeff, > > > On 10/3/18 8

Re: [OMPI users] opal_pmix_base_select failed for master and 4.0.0

2018-10-05 Thread Siegmar Gross
Hi Ralph, hi Jeff, On 10/3/18 8:14 PM, Ralph H Castain wrote: Jeff and I talked and believe the patch in https://github.com/open-mpi/ompi/pull/5836 should fix the problem. Today I've installed openmpi-master-201810050304-5f1c940 and openmpi-v4.0.x-201810050241-c079666. Unfortunately, I stil

[OMPI users] error building openmpi-master-201810050304-5f1c940 on Linux with Sun C

2018-10-05 Thread Siegmar Gross
Hi, I've tried to install openmpi-master-201810050304-5f1c940 on my "SUSE Linux Enterprise Server 12.3 (x86_64)" with Sun C 5.15 (Oracle Developer Studio 12.6). Unfortunately, I get the following error. loki openmpi-master-201810050304-5f1c940-Linux.x86_64.64_cc 128 head -7 config.log | tail -