Re: [OMPI users] Missing data with MPI I/O and NFS

2017-10-12 Thread Edgar Gabriel
I opened an issue on this, hope to have the fix available next week. https://github.com/open-mpi/ompi/issues/4334 Thanks Edgar On 10/12/2017 8:36 PM, Edgar Gabriel wrote: try for now to switch to the romio314 component with OpenMPI. There is an issue with NFS and OMPIO that I am aware of and w

Re: [OMPI users] Missing data with MPI I/O and NFS

2017-10-12 Thread Edgar Gabriel
try for now to switch to the romio314 component with OpenMPI. There is an issue with NFS and OMPIO that I am aware of and working on, that might trigger this behavior (although it should actually work for collective I/O even in that case). try to set something like mpirun --mca io romio314 ..

[OMPI users] Missing data with MPI I/O and NFS

2017-10-12 Thread Stephen Guzik
Hi, I'm having trouble with parallel I/O to a file system mounted with NFS over an infiniband network.  In my test code, I'm simply writing 1 byte per process to the same file.  When using two nodes, some bytes are not written (zero bits in the unwritten bytes).  Usually at least some data from ea

[OMPI users] Hybrid MPI+OpenMP benchmarks (looking for)

2017-10-12 Thread Sasso, John (GE Digital, consultant)
Thank you Peter. I downloaded and built, and think it will suit our needs. -Original Message- From: Peter Kjellström [mailto:c...@nsc.liu.se] Sent: Tuesday, October 10, 2017 5:38 AM To: Sasso, John (GE Digital, consultant) Cc: Open MPI Users Subject: EXT: Re: [OMPI users] Hybrid MPI+