Re: [OMPI users] Data corruption in v2.0.1 using MPI_IN_PLACE with MPI_Ireduce

2016-10-06 Thread Gilles Gouaillardet
Andre, this issue has already been reported and fixed (the fix will be available in v2.0.2) Meanwhile, you can manually apply the fix available at https://github.com/open-mpi/ompi/commit/78f74e58d09a3958043a0c70861b26664def3bb3.patch Cheers, Gilles On 10/7/2016 8:44 AM, Andre Kessler w

[OMPI users] Data corruption in v2.0.1 using MPI_IN_PLACE with MPI_Ireduce

2016-10-06 Thread Andre Kessler
Hi folks, I've been running into some issues using the MPI_IN_PLACE option with MPI_Ireduce, in what seems to be a regression from OpenMPI v1.10.1. In particular, I encounter data corruption if non-root ranks supply the same pointers for 'send' and 'recv', even though this should have no bearin

Re: [OMPI users] users Digest, Vol 3619, Issue 1

2016-10-06 Thread Mahdi, Sam
t; 2) error in MPI_Send() shown below on local machine with > > Linux 3.10.0-229.el7.x86_64 > > [archimedes:31962] shmem: mmap: an error occurred while > > determining whether or not > > /tmp/openmpi-sessions-1007@archimedes_0/58444/1/shared_ > mem_pool.archimedes

[OMPI users] Crash during MPI_Finalize

2016-10-06 Thread George Reeke
Dear colleagues, I have a parallel MPI application written in C that works normally in a serial version and in the parallel version in the sense that all numerical output is correct. When it tries to shut down, it gives the following console error messsage: Primary job terminated normally, but 1

Re: [OMPI users] [EXTERNAL] Using Open MPI with multiple versions of GCC and G++

2016-10-06 Thread Simon Hammond
Can you try setting the environment variable OMPI_CXX= Then run: mpicxx -v and see what version it says its running. You may have to be careful mixing the versions too far apart. S. — Si Hammond Scalable Computer Architectures Center for Computing Research Sandia National Laboratories, NM, U

Re: [OMPI users] Using Open MPI with multiple versions of GCC and G++

2016-10-06 Thread Jeff Squyres (jsquyres)
On Oct 6, 2016, at 9:56 AM, Aditya wrote: > > I'm a senior year Computer Science student working on Parallel Clustering > Algorithms at BITS Pilani, India. I have a few questions about using mpicc > and mpicxx with multiple versions of gcc / g++. > > I am using Ubuntu 12.04 equipped with gcc

[OMPI users] Using Open MPI with multiple versions of GCC and G++

2016-10-06 Thread Aditya
Hello, I'm a senior year Computer Science student working on Parallel Clustering Algorithms at BITS Pilani, India. I have a few questions about using mpicc and mpicxx with multiple versions of gcc / g++. I am using Ubuntu 12.04 equipped with gcc 4.6.4. The currently installed mpicc is bound to gc