Re: [OMPI users] Intercommunicators Collective Communciation

2014-05-09 Thread Spenser Gilliland
Thanks for the quick response. I'm having alot of fun learning MPI and this mailing list has been invaluable. So, If I do a scatter on an inter communicator will this use all left process to scatter on all right processes? Where the left processes define MPI_ROOT and the right processes define

Re: [OMPI users] Intercommunicators Collective Communciation

2014-05-09 Thread Jeff Squyres (jsquyres)
On May 9, 2014, at 7:56 PM, Spenser Gilliland wrote: > I'm having some trouble understanding Intercommunicators with > Collective Communication. Is there a collective routine to express a > transfer from all left process to all right processes? or vice versa? The intercomm collectives are all b

[OMPI users] Intercommunicators Collective Communciation

2014-05-09 Thread Spenser Gilliland
Hi, I'm having some trouble understanding Intercommunicators with Collective Communication. Is there a collective routine to express a transfer from all left process to all right processes? or vice versa? Thanks, Spenser -- Spenser Gilliland Computer Engineer Doctoral Candidate

Re: [OMPI users] OPENIB unknown transport errors

2014-05-09 Thread Joshua Ladd
Just wondering if you've tried with the latest stable OMPI, 1.8.1? I'm wondering if this is an issue with the OOB. If you have a debug build, you can run -mca btl_openib_verbose 10 Josh On Fri, May 9, 2014 at 6:26 PM, Joshua Ladd wrote: > Hi, Tim > > Run "ibstat" on each host: > > 1. Make sure

Re: [OMPI users] OPENIB unknown transport errors

2014-05-09 Thread Tim Miller
I've checked the links repeatedly with "ibstatus" and they look OK. Both nodes shoe a link layer of "InfiniBand". As I stated, everything works well with MVAPICH2, so I don't suspect a physical or link layer problem (but I could always be wrong on that). Tim On Fri, May 9, 2014 at 6:26 PM, Josh

Re: [OMPI users] OPENIB unknown transport errors

2014-05-09 Thread Joshua Ladd
Hi, Tim Run "ibstat" on each host: 1. Make sure the adapters are alive and active. 2. Look at the Link Layer settings for host w34. Does it match host w4's? Josh On Fri, May 9, 2014 at 1:18 PM, Tim Miller wrote: > Hi All, > > We're using OpenMPI 1.7.3 with Mellanox ConnectX InfiniBand adap

[OMPI users] OPENIB unknown transport errors

2014-05-09 Thread Tim Miller
Hi All, We're using OpenMPI 1.7.3 with Mellanox ConnectX InfiniBand adapters, and periodically our jobs abort at start-up with the following error: === Open MPI detected two different OpenFabrics transport types in the same Infiniband network. Such mixed network trasport configuration is not supp

Re: [OMPI users] No output when adding host to hostfile

2014-05-09 Thread Ralph Castain
There is a known bug in the 1.8.1 release whereby daemons failing to start on a remote node will cause a silent failure. This has been fixed for the upcoming 1.8.2 release, but you might want to use one of the nightly 1.8.2 snapshots in the interim. Most likely causes: * not finding the requir

[OMPI users] No output when adding host to hostfile

2014-05-09 Thread Wijnberg, Tom
Hi, I have encountered a problem with openmpi I can't seem to be able to diagnose or find precedence in in the mailing-list. I have two pc's with a fresh install of Arch linux and openmpi 1.8.1. One is a dedicated PC and the other is a virtualbox installation. The virtualbox install is the master