Dominique,
It looks like you are compiling Open MPI with Homebrew. The flags they use in
the formula when --enable-mpi-thread-multiple is wrong.
c.f. a similar problem with MacPorts
https://lists.macosforge.org/pipermail/macports-tickets/2013-June/138145.html.
Pierre
On Nov 23, 2013, at 4:56 PM
May have to wait for Nathan on Mon - I'm not familiar enough with the XE
environment. One thing I note: in your modules, I see cray-mpich2 but not OMPI.
Are you sure you are using the OMPI you built?
What version of OMPI is this?
You can add --display-alloc to your cmd line to see what OMPI thi
Here is the module environment, and I allocate interactive node by "qsub -I
-lmppwidth=32 -lmppnppn=16."
module list
Currently Loaded Modulefiles:
1) modules/3.2.6.7
2) craype-network-gemini
3) cray-mpich2/5.6.4
4) atp/1.6.3
5) xe-sysroot/4.1.40
6) switch/1.0-1.0401.36779.2.72.gem
7)
Hmmm...well, it seems to work for me:
$ mpirun -n 4 ./thread_init
Calling MPI_Init_thread...
Calling MPI_Init_thread...
Calling MPI_Init_thread...
Calling MPI_Init_thread...
MPI_Init_thread returned, provided = 3
MPI_Init_thread returned, provided = 3
MPI_Init_thread returned, provided = 3
MPI_Ini
Strange - I run on Mavericks now without problem. Can you run "mpirun -n 1
hostname"?
You also might want to check your PATH and LD_LIBRARY_PATH to ensure you have
the prefix where you installed OMPI 1.6.5 at the front. Mac distributes a very
old version of OMPI with its software and you don't
My guess is that you aren't doing the allocation correctly - since you are
using qsub, can I assume you have Moab as your scheduler?
aprun should be forwarding the envars - do you see them if you just run "aprun
-n 1 printenv"?
On Nov 23, 2013, at 2:13 PM, Teranishi, Keita wrote:
> Hi,
>
> I
Hi,
I installed OpenMPI on our small XE6 using the configure options under /contrib
directory. It appears it is working fine, but it ignores MCA parameters (set
in env var). So I switched to mpirun (in OpenMPI) and it can handle MCA
parameters somehow. However, mpirun fails to allocate proc
Yes, Ethernet and infiniband networks which are connecting nodes
On Nov 22, 2013 11:55 PM, "Reuti" wrote:
> Hi,
>
> Am 20.11.2013 um 21:42 schrieb Venkat Reddy:
>
> > Hi Team,
> >
> > I am compiled the OpenFoam-1.7.1,openFoam-2.2.1,OpenFoam-2.2.2 versions.
> > All the versions same problem that s
