Re: [OMPI users] ierr vs ierror in F90 mpi module

2013-04-25 Thread W Spector
Jeff, I tried building 1.7.1 on my Ubuntu system. The default gfortran is v4.6.3, so configure won't enable the mpi_f08 module build. I also tried a three week old snapshot of the gfortran 4.9 trunk. This has Tobias's new TYPE(*) in it, but not his latest !GCC$ attributes NO_ARG_CHECK stuf

Re: [OMPI users] multithreaded jobs

2013-04-25 Thread Ralph Castain
On Apr 25, 2013, at 5:33 PM, Vladimir Yamshchikov wrote: > $NSLOTS is what requested by -pe openmpi in the script, my > understanding that by default it is threads. No - it is the number of processing elements (typically cores) that are assigned to your job. > $NSLOTS processes each spinnin

Re: [OMPI users] multithreaded jobs

2013-04-25 Thread Vladimir Yamshchikov
$NSLOTS is what requested by -pe openmpi in the script, my understanding that by default it is threads. $NSLOTS processes each spinning -t threads is not what is wanted as each process could spin off more threads then there are physical or logical cores per node, thus degrading performance or eve

Re: [OMPI users] assert in opal_datatype_is_contiguous_memory_layout

2013-04-25 Thread Jeff Squyres (jsquyres)
To follow up for the web archives... We fixed this bug off-list. It will be included in 1.6.5 and (likely) 1.7.2. On Apr 5, 2013, at 3:18 PM, Eric Chamberland wrote: > Hi again, > > I have attached a very small example which raise the assertion. > > The problem is arising from a process wh

Re: [OMPI users] multithreaded jobs

2013-04-25 Thread Ralph Castain
Depends on what NSLOTS is and what your program's "-t" option does :-) Assuming your "-t" tells your program the number of threads to start, then the command you show will execute NSLOTS number of processes, each of which will spin off the number of indicated threads. On Apr 25, 2013, at 11:39

Re: [OMPI users] Problem with Openmpi-1.4.0 and qlogic-ofed-1.5.4.1

2013-04-25 Thread Jeff Squyres (jsquyres)
I'm guessing you're the alter ego of http://www.open-mpi.org/community/lists/devel/2013/04/12309.php? :-) My first suggestion to you is to upgrade your version of Open MPI -- 1.4.0 is ancient. Can you upgrade to 1.6.4? On Apr 25, 2013, at 2:08 PM, Padma Pavani wrote: > Hi Team, > > I am f

[OMPI users] multithreaded jobs

2013-04-25 Thread Vladimir Yamshchikov
Hi all, The FAQ has excellent entries on how to schedule on a SGE cluster non-MPI jobs, yet only simple jobs are exemplified. But wnat about jobs that can be run in multithreaded mode, say specifying option -t number_of_threads? In other words, consider a command an esample qsub script: ..

[OMPI users] Problem with Openmpi-1.4.0 and qlogic-ofed-1.5.4.1

2013-04-25 Thread Padma Pavani
Hi Team, I am facing some problem while running HPL benchmark. I am using Intel mpi -4.0.1 with Qlogic-OFED-1.5.4.1 to run benchmark and also tried with openmpi-1.4.0 but getting same error. Error File : [compute-0-1.local:06936] [[14544,1],25] ORTE_ERROR_LOG: A message is attempting to be

Re: [OMPI users] QLogic HCA random crash after prolonged use

2013-04-25 Thread Dave Love
"Elken, Tom" writes: >> > Intel has acquired the InfiniBand assets of QLogic >> > about a year ago. These SDR HCAs are no longer supported, but should >> > still work. > [Tom] > I guess the more important part of what I wrote is that " These SDR HCAs are > no longer supported" :) Sure, though

Re: [OMPI users] QLogic HCA random crash after prolonged use

2013-04-25 Thread Ralph Castain
On Apr 25, 2013, at 9:11 AM, Dave Love wrote: > Ralph Castain writes: > >> On Apr 24, 2013, at 8:58 AM, Dave Love wrote: >> >>> "Elken, Tom" writes: >>> > I have seen it recommended to use psm instead of openib for QLogic cards. [Tom] Yes. PSM will perform better and be mor

Re: [OMPI users] QLogic HCA random crash after prolonged use

2013-04-25 Thread Dave Love
Ralph Castain writes: > On Apr 24, 2013, at 8:58 AM, Dave Love wrote: > >> "Elken, Tom" writes: >> I have seen it recommended to use psm instead of openib for QLogic cards. >>> [Tom] >>> Yes. PSM will perform better and be more stable when running OpenMPI >>> than using verbs. >> >> Bu

Re: [OMPI users] ierr vs ierror in F90 mpi module

2013-04-25 Thread W Spector
Hi Jeff, I just downloaded 1.7.1. The new files in the use-mpi-f08 look great! However the use-mpi-tkr and use-mpi-ignore-tkr directories don't fare so well. Literally all the interfaces are still 'ierr'. While I realize that both the F90 mpi module and interface checking, were optional pr

[OMPI users] CfP 2013 Workshop on Middleware for HPC and Big Data Systems (MHPC'13)

2013-04-25 Thread MHPC 2013
we apologize if you receive multiple copies of this message === CALL FOR PAPERS 2013 Workshop on Middleware for HPC and Big Data Systems MHPC '13 as part of Euro-Par 2013, Aachen, Germany =