[OMPI users] oMPI hang with IB question

2012-03-20 Thread Dylan Nelson
Hello, I've been having trouble for awhile now running some OpenMPI+IB jobs on multiple tasks. The problems are all "hangs" and are not reproducible - the same execution started again will in general proceed just fine where previously it got stuck, but then later get stuck. These stuck processes a

Re: [OMPI users] Problem with MPI_Barrier (Inter-communicator)

2012-03-20 Thread Rodrigo Oliveira
The command I use to compile and run is: mpic++ server.cc -o server && mpic++ client.cc -o client && mpirun -np 1 ./server Rodrigo On Tue, Mar 20, 2012 at 3:40 PM, Rodrigo Oliveira wrote: > Hi Edgar. > > Thanks for the response. The simplified code is attached: server, client > and a .h contai

Re: [OMPI users] Problem with MPI_Barrier (Inter-communicator)

2012-03-20 Thread Rodrigo Oliveira
Hi Edgar. Thanks for the response. The simplified code is attached: server, client and a .h containing some constants. I put some "prints" to show the behavior. Regards Rodrigo On Tue, Mar 20, 2012 at 11:47 AM, Edgar Gabriel wrote: > do you have by any chance the actual or a small reproducer

Re: [OMPI users] [EXTERNAL] Possible to build ompi-1.4.3 or 1.4.5 without a C++ compiler?

2012-03-20 Thread Barrett, Brian W
David - No problem. Generally, you can get away with that trick whenever you're compiling shared libraries and using the system compiler. The biggest advantage is that the chance of the code being mis-compiled goes down significantly when using the system compiler. The kernel is a good stress t

Re: [OMPI users] [EXTERNAL] Possible to build ompi-1.4.3 or 1.4.5 without a C++ compiler?

2012-03-20 Thread Gunter, David O
You are right, Brian. I failed to build from a fresh untar, so I had some leftover intel-compiled bits. Your suggestion seems to work so I'll pass it along to the user to try out. Thanks! -david -- David Gunter HPC-3: Infrastructure Team Los Alamos National Laboratory On Mar 20, 2012, at 9

Re: [OMPI users] [EXTERNAL] Possible to build ompi-1.4.3 or 1.4.5 without a C++ compiler?

2012-03-20 Thread Tim Prince
On 03/20/2012 08:35 AM, Gunter, David O wrote: I wish it were that easy. When I go that route, I get error messages like the following when trying to compile the parallel code with Intel: libmpi.so: undefined reference to `__intel_sse2_strcpy' and other messages for every single Intel-imple

Re: [OMPI users] [EXTERNAL] Possible to build ompi-1.4.3 or 1.4.5 without a C++ compiler?

2012-03-20 Thread Barrett, Brian W
That doesn't make a whole lot of sense; what compile / link line is resulting in that error message? The error message is saying that libmpi.so depends on an Intel built-in function, but since you built libmpi.so with gcc, that shouldn't happen. Are you sure that libmpi.so wasn't build against th

Re: [OMPI users] [EXTERNAL] Possible to build ompi-1.4.3 or 1.4.5 without a C++ compiler?

2012-03-20 Thread Gunter, David O
I tried that at first but hit the same problem I'm having now - lot's of "__intel_" undefined errors when I go to compile even the simplest of mpi codes. -david -- David Gunter HPC-3: Infrastructure Team Los Alamos National Laboratory On Mar 20, 2012, at 9:36 AM, Jeffrey Squyres wrote: > Can

Re: [OMPI users] [EXTERNAL] Possible to build ompi-1.4.3 or 1.4.5 without a C++ compiler?

2012-03-20 Thread Jeffrey Squyres
Can you build with g++ instead of icpc? All the C++ MPI bindings are inlined anyway, so the performance difference between the two might be negligible. On Mar 20, 2012, at 11:35 AM, Gunter, David O wrote: > I wish it were that easy. When I go that route, I get error messages like > the follo

Re: [OMPI users] [EXTERNAL] Possible to build ompi-1.4.3 or 1.4.5 without a C++ compiler?

2012-03-20 Thread Gunter, David O
I wish it were that easy. When I go that route, I get error messages like the following when trying to compile the parallel code with Intel: libmpi.so: undefined reference to `__intel_sse2_strcpy' and other messages for every single Intel-implemented standard C-function. -david -- David Gunte

Re: [OMPI users] Problem with MPI_Barrier (Inter-communicator)

2012-03-20 Thread Edgar Gabriel
do you have by any chance the actual or a small reproducer? It might be much easier to hunt the problem down... Thanks Edgar On 3/19/2012 8:12 PM, Rodrigo Oliveira wrote: > Hi there. > > I am facing a very strange problem when using MPI_Barrier over an > inter-communicator after some operations

Re: [OMPI users] [EXTERNAL] Possible to build ompi-1.4.3 or 1.4.5 without a C++ compiler?

2012-03-20 Thread Barrett, Brian W
On 3/20/12 10:06 AM, "Gunter, David O" wrote: >I need to build ompi-1.4.3 (or the newer 1.4.5) with an older Intel 10.0 >compiler, but on a newer system in which the default g++ headers are >incompatible with Intel. Thus the C and Fortran compilers function >normally but the Intel C++ compiler fa

[OMPI users] Possible to build ompi-1.4.3 or 1.4.5 without a C++ compiler?

2012-03-20 Thread Gunter, David O
I need to build ompi-1.4.3 (or the newer 1.4.5) with an older Intel 10.0 compiler, but on a newer system in which the default g++ headers are incompatible with Intel. Thus the C and Fortran compilers function normally but the Intel C++ compiler fails to build even a simple "hello world" code. I

Re: [OMPI users] file `opal/mca/hwloc/hwloc131/configure.m4' does not exist in svn repo

2012-03-20 Thread Jeffrey Squyres
Did you run autogen.pl? (if you're working with the Open MPI trunk for development reasons, you might want to post to the de...@open-mpi.org list, not the general users list) On Mar 20, 2012, at 8:31 AM, Ilias Miroslav wrote: > Dear all, > > I updated ompi-trunk to the most recent trunk: > >

[OMPI users] file `opal/mca/hwloc/hwloc131/configure.m4' does not exist in svn repo

2012-03-20 Thread Ilias Miroslav
Dear all, I updated ompi-trunk to the most recent trunk: il...@frpd2.utcpd.sk:~/bin/openmpi_i32lp64_intel_static/ompi-trunk/.svn info Path: . URL: http://svn.open-mpi.org/svn/ompi/trunk Repository Root: http://svn.open-mpi.org/svn/ompi Repository UUID: 63e3feb5-37d5-0310-a306-e8a459e722fe Revisio