[OMPI users] Problem running an mpi applicatio​n on nodes with more than one interface

2012-02-16 Thread Jingcha Joba
Hello Everyone, This is my 1st post in open-mpi forum. I am trying to run a simple program which does Sendrecv between two nodes having 2 interface cards on each of two nodes. Both the nodes are running RHEL6, with open-mpi 1.4.4 on a 8 core Xeon processor. What I noticed was that when using two o

Re: [OMPI users] compilation error with pgcc Unknown switch

2012-02-16 Thread Nathan Hjelm
contrib/platform/lanl/cray-xe6 is within the Open MPI trunk. It contains platform files for an optimized and a debug build (for configure --platform). -Nathan On Thu, 16 Feb 2012, Abhinav Sarje wrote: Hi again, Could you tell me the complete path of the svn repo? I think I am missing somethi

Re: [OMPI users] compilation error with pgcc Unknown switch

2012-02-16 Thread Abhinav Sarje
Hi yet again, Nathan, nevermind my previous email. I found the svn location. I will give it a try now. Thanks! Abhinav. On Thu, Feb 16, 2012 at 12:00 PM, Abhinav Sarje wrote: > Hi again, > > Could you tell me the complete path of the svn repo? I think I am > missing something there. Also, can I

Re: [OMPI users] compilation error with pgcc Unknown switch

2012-02-16 Thread Abhinav Sarje
Hi again, Could you tell me the complete path of the svn repo? I think I am missing something there. Also, can I checkout this version anonymously, or do I need a dev account? Thanks, Abhinav. On Thu, Feb 16, 2012 at 11:52 AM, Abhinav Sarje wrote: > Hi Nathan, > > I had earlier tried to compile

Re: [OMPI users] compilation error with pgcc Unknown switch

2012-02-16 Thread Abhinav Sarje
Hi Nathan, I had earlier tried to compile OpenMPI with just PGI compilers (without cray wrapper), but with that my code was not able to run on the compute nodes of the cray cluster (it just ran on the MOM node). Therefore I have been trying to compiler OpenMPI with the cray wrappers. I will check

Re: [OMPI users] compilation error with pgcc Unknown switch

2012-02-16 Thread Nathan Hjelm
Abhinav, you shouldn't be using the cray wrappers to build Open MPI or anything linked against Open MPI. The Cray wrappers will automatically include lots of stuff you don't want. Use pgcc, pgcc, or icc directly. You shouldn't have any trouble running in parallel with either aprun or mpirun (or

Re: [OMPI users] help: sm btl does not work when I specify the same host twice or more in the node list

2012-02-16 Thread Jeff Squyres
On Feb 16, 2012, at 9:09 AM, ya...@adina.com wrote: > (2) Solution to this issue: > > You may set the $TMPDIR to a same directory on the same host if > possible; or you could setenv OMPI_PREFIX_ENV to a common > directory for MPI processes on the same host while keeping your > $TMPDIR setting.

Re: [OMPI users] [Open MPI Announce] Open MPI v1.4.5 released

2012-02-16 Thread Prentice Bisbal
On 02/15/2012 07:44 AM, Reuti wrote: > Hi, > > Am 15.02.2012 um 03:48 schrieb alexalex43210: > >> But I am a novice for the parallel computation, I often use Fortran to >> compile my program, now I want to use the Parallel, can you give me some >> help how to begin? >> PS: I learned about OP

Re: [OMPI users] help: sm btl does not work when I specify the same host twice or more in the node list

2012-02-16 Thread yanyg
OK, with Jeff's kind help, I solved this issue in a very simple way. Now I would like to report back the reason for this issue and the solution. (1) The scenario under which this issue happened: In my OPMI environment, the $TMPDIR envar is set to different scratch directory for different MPI

Re: [OMPI users] Problems with gridengine integration on RHEL 6

2012-02-16 Thread Dave Love
Brian McNally writes: > Hi Dave, > > I looked through the INSTALL, VERSION, NEWS, and README files in the > 1.5.4 openmpi tarball but didn't see what you were referring to. I can't access the web site, but there's an item in the notes on the download page about the bug. It must also be in the m