On Oct 31, 2011, at 12:33 PM, Ralph Castain wrote:
>> A colleague who reads this list pointed out to me that the
>> problem is probably because the cluster that I'm using has
>> QLogic infiniband cards that apparently require
>> OMPI_MCA_orte_precondition_transports to be set. That
>> may be the
Setting OMPI_MCA_mtl=^psm does work. Thanks very much
for your help.
- Steve
From: users-boun...@open-mpi.org [users-boun...@open-mpi.org] on behalf of
Ralph Castain [r...@open-mpi.org]
Sent: Monday, October 31, 2011 12:33 PM
To: Open MPI Users
Subject:
On Oct 31, 2011, at 10:27 AM, Weston, Stephen wrote:
> I'm just running it directly from a shell. That may sound crazy,
> but my original problem was trying to install the Rmpi package,
> which is the R interface to MPI. The Rmpi package calls
> MPI_Init when it is loaded, and the package is lo
I'm just running it directly from a shell. That may sound crazy,
but my original problem was trying to install the Rmpi package,
which is the R interface to MPI. The Rmpi package calls
MPI_Init when it is loaded, and the package is loaded when it
is installed, so the installation failed until I i
How are you running the job without mpirun? Is this under slurm or some other
RM?
On Oct 31, 2011, at 9:46 AM, Weston, Stephen wrote:
> Hello,
>
> I'm seeing an error on one of our clusters when executing the
> MPI_Init function in a program that is _not_ invoked using the
> mpirun command. T
Hello,
I'm seeing an error on one of our clusters when executing the
MPI_Init function in a program that is _not_ invoked using the
mpirun command. The error is:
Error obtaining unique transport key from ORTE
(orte_precondition_transports not present in the environment).
followed by "It
I wonder if the try_compile step is failing. Can you send a compressed
copy of your config.log from this build?
-- Josh
On Mon, Oct 31, 2011 at 10:04 AM, wrote:
> Hi !
>
> I am trying to compile openmpi 1.4.4 with Torque, Infiniband and blcr
> checkpoint support on Puias Linux 6.x (free de
Hi !
I am trying to compile openmpi 1.4.4 with Torque, Infiniband and blcr
checkpoint support on Puias Linux 6.x (free derivate of RHEL 6x).
all packages of blcr are installed (including header files blcr-devel)
even torque ..
torque-libs, openib libraries are found ..
But, when execu
