[OMPI users] users Digest, Vol 1217, Issue 2, Message3

2009-05-21 Thread jan
Thanks Jeff. We solve this problem finally. Download the newest OFED-1.4.1-rc6.tgz, and reinstall all node's infiniband drivers and utilities. Everythings looks good, and I have my own coffee time now. Thanks again. Best Regards, Gloria Jan Wavelink Technology Inc I don't think the speed of

Re: [OMPI users] Bug in ompi-restart

2009-05-21 Thread Josh Hursey
(Moving to ompi-users so that others might benefit from the answer) Currently you cannot pass the --prefix option to ompi-restart. In fact, most of the mpirun options are not exposed by the ompi-restart tool (it becomes difficult to maintain). To assist users that want to set additional opt

Re: [OMPI users] scaling problem with openmpi

2009-05-21 Thread Pavel Shamis (Pasha)
I tried to run with the first dynamic rules file that Pavel proposed and it works, the time per one MD step on 48 cores decreased from 2.8 s to 1.8 s as expected. Good news :-) Pasha. Thanks Roman On Wed, May 20, 2009 at 7:18 PM, Pavel Shamis (Pasha) wrote: Tomorrow I will add some