Re: [OMPI users] Problem with AlltoAll routine

2008-05-17 Thread Nysal Jan
Gabriele, Can you try with Open MPI 1.2.6. It has a parameter to disable early completion, set it to zero (-mca pml_ob1_use_early_completion 0). --Nysal On Wed, May 7, 2008 at 9:29 PM, Gabriele FATIGATI wrote: > I have attached informations requested about Infiniband net and OpenMPi > enviromen

Re: [OMPI users] qsub and limits.conf

2008-05-17 Thread Jeff Squyres
If you are using the native Torque capabilities to launch Open MPI jobs, note that limits.conf is not necessarily obeyed. I'm not a Torque expert, but you should probably check out: http://www.open-mpi.org/faq/?category=openfabrics#ib-locked-pages-more And check the Torque docs about ho

Re: [OMPI users] qsub and limits.conf

2008-05-17 Thread Adrian Knoth
On Sat, May 17, 2008 at 04:58:30PM +0200, Javier Lazaro wrote: > I have install torque-2.3.0 and openmpi-1.2.3. Open MPI-1.2.6 is available. > I make tests and I have discovered that the jobs launched with the parameter > '-hostfile' or '-machinefile' stops are to exceed the limits in the file >

[OMPI users] qsub and limits.conf

2008-05-17 Thread Javier Lazaro
I have install torque-2.3.0 and openmpi-1.2.3. I make tests and I have discovered that the jobs launched with the parameter '-hostfile' or '-machinefile' stops are to exceed the limits in the file /etc/security/limits.conf More details: file hola.c #include #include #include "mpi.h" int main(in

Re: [OMPI users] compiling from source from svn

2008-05-17 Thread Karsten Bolding
Hi again After having properly read the HACKING file - and especially the part relating to the gnu-tools - I can now compile and install the svn version of OpenMPI with gcc (4.2.3), and ifort (10.0). Next step will be to try it out. Thanks for your help - sofar. Karsten On Fri, May 16, 2008 at

Re: [OMPI users] compiling from source from svn

2008-05-17 Thread Karsten Bolding
Hi Jeff Whats the fast way specifying an alternative place for libtool for building OpenMPI. I tried: export PATH=/home/kb/local/bin:$PATH type libtool libtool is /home/kb/local/bin/libtool but I still get the same error. Karsten On Fri, May 16, 2008 at 06:34:19 -0400, Jeff Squyres wrote: > On