Re: [OMPI users] Open MPI 1.2.4 verbosity w.r.t. osc pt2pt

2007-12-12 Thread Lisandro Dalcin
On 12/12/07, Jeff Squyres wrote: > On Dec 12, 2007, at 6:32 PM, Lisandro Dalcin wrote: > > Do I have the libtool API calls available when linking against > > libmpi.so ? > > You should, yes. OK, but now I realize that I cannot simply call libtool dlopen() inconditionally, as libmpi.so could not e

Re: [OMPI users] parpack with openmpi

2007-12-12 Thread Brock Palen
Yes, the software came with its own. And i removed it, mpif77 takes care of not having mpif.h in the directory just as it should. I should mention (sorry) that the single, complex and double complex examples work. only the double (real) examples fail. Brock Palen Center for Advanced Comp

Re: [OMPI users] parpack with openmpi

2007-12-12 Thread Jeff Squyres
This *usually* happens when you include the mpif.h from a different MPI implementation. Can you check that? On Dec 12, 2007, at 5:15 PM, Brock Palen wrote: Has anyone ever built parpack (http://www.caam.rice.edu/software/ ARPACK/) with openmpi? It compiles but some of the examples give: [

Re: [OMPI users] Open MPI 1.2.4 verbosity w.r.t. osc pt2pt

2007-12-12 Thread Jeff Squyres
On Dec 12, 2007, at 6:32 PM, Lisandro Dalcin wrote: Yes, this is problematic; dlopen is fun on all the various OS's... FWIW: we use the Libtool DL library for this kind of portability; OMPI itself doesn't have all the logic for the different OS loaders. Do I have the libtool API calls avai

Re: [OMPI users] Open MPI 1.2.4 verbosity w.r.t. osc pt2pt

2007-12-12 Thread Lisandro Dalcin
On 12/12/07, Jeff Squyres wrote: > Yes, this is problematic; dlopen is fun on all the various OS's... > > FWIW: we use the Libtool DL library for this kind of portability; OMPI > itself doesn't have all the logic for the different OS loaders. Do I have the libtool API calls available when linking

[OMPI users] parpack with openmpi

2007-12-12 Thread Brock Palen
Has anyone ever built parpack (http://www.caam.rice.edu/software/ ARPACK/) with openmpi? It compiles but some of the examples give: [nyx-login1.engin.umich.edu:12173] *** on communicator MPI_COMM_WORLD [nyx-login1.engin.umich.edu:12173] *** MPI_ERR_TYPE: invalid datatype [nyx-login1.engin.umic

Re: [OMPI users] Dual ethernet & OpenMPI

2007-12-12 Thread George Bosilca
You can specify which network interface should be used by Open MPI via the btl_tcp_if_include MCA parameter (using the interface name, e.g. eth0,eth1). You can even specify how the messages will be distributed between the networks (please read the FAQ for more info about this). To test that

Re: [OMPI users] Problems with GATHERV on one process

2007-12-12 Thread Moreland, Kenneth
Thanks Tim. I've since noticed similar problems with MPI_Allgatherv and MPI_Scatterv. I'm guessing they are all related. Do you happen to know if those are being fixed as well? -Ken > -Original Message- > From: users-boun...@open-mpi.org [mailto:users-boun...@open-mpi.org] On > Behalf

[OMPI users] undefined reference to `pthread_atfork' (Lahey Fujitsu compiler AMD64)

2007-12-12 Thread Alex Pletzer
Hi, I'm on a AMD64 box (Linux quartic.txcorp.com 2.6.19-1.2288.fc5 #1 SMP Sat Feb 10 14:59:35 EST 2007 x86_64 x86_64 x86_64 GNU/Linux) and compiled openmpi-1.2.4 using the Lahey-Fujitsu compiler (lfc). The compilation of openmpi went fine. $ ../configure --enable-mpi-f90 --enable-mpi-f77 --

[OMPI users] Dual ethernet & OpenMPI

2007-12-12 Thread Michael
In the past I configured a Linux cluster by bonding two ethernet ports together on each node (with the master having a third port of outside communication); however, recent discussions seem to say that if I have two ethernet cards OpenMPI can handle all the setup itself. My question is what

Re: [OMPI users] Compiling 1.2.4 using Intel Compiler 10.1.007 on Leopard

2007-12-12 Thread Warner Yuen
Hi Jeff,It seems that the problems are partially the compilers fault, maybe the updated compilers didn't catch all the problems filed against the last release? Why else would I need to add the "-no-multibyte-chars" flag for pretty much everything that I build with ICC? Also, its odd that I have to

Re: [OMPI users] Open MPI 1.2.4 verbosity w.r.t. osc pt2pt

2007-12-12 Thread Jeff Squyres
On Dec 11, 2007, at 9:08 AM, Lisandro Dalcin wrote: (for a nicely-formatted refresher of the issues, check out https://svn.open-mpi.org/trac/ompi/wiki/Linkers) Sorry for the late response... I've finally 'solved' this issue by using RTLD_GLOBAL for loading the Python extension module that ac

[OMPI users] MPI::Intracomm::Spawn and cluster configuration

2007-12-12 Thread Elena Zhebel
Hello, I'm working on a MPI application where I'm using OpenMPI instead of MPICH. In my "master" program I call the function MPI::Intracomm::Spawn which spawns "slave" processes. It is not clear for me how to spawn the "slave" processes over the network. Currently "master" creates "slaves" on th

Re: [OMPI users] Problems compiling 1.2.4 using Intel Compiler 10.1.006 on Leopard

2007-12-12 Thread Jeff Squyres
My primary work platform is a MacBook Pro, but I don't specifically develop for OS X, so I don't have any special compilers. Sorry to ask this because I think the information was sent before, but could you send all the compile/failure information? http://www.open-mpi.org/community/help/

Re: [OMPI users] error with Vprotocol pessimist

2007-12-12 Thread Aurelien Bouteiller
I could reproduce and fix the bug. It will be corrected in trunk as soon as the svn is online again. Thanks for reporting the problem. Aurelien Le 11 déc. 07 à 15:02, Aurelien Bouteiller a écrit : I cannot reproduce the error. Please make sure you have the lib/ openmpi/mca_pml_v.so file in y