Re: [OMPI users] "bash: orted: command not found" running NPB2.4 with tau

2007-08-16 Thread Tom Conerly
Thanks, that worked perfectly. On 8/16/07, Tom Conerly wrote: > > That worked perfectly. Thanks. > > On 8/16/07, Si Hammond wrote: > > > > > > Tom, > > > > I've also had this problem. I looked in my bashrc and found that it > > returned prior to setting the path variable if it was being run in >

Re: [OMPI users] "bash: orted: command not found" running NPB2.4 with tau

2007-08-16 Thread Si Hammond
Tom, I've also had this problem. I looked in my bashrc and found that it returned prior to setting the path variable if it was being run in non-interactive mode. This sounds similar to your situation. You'll need to comment this out if you rely on it to set your path. Si Hammond On 16

[OMPI users] "bash: orted: command not found" running NPB2.4 with tau

2007-08-16 Thread Tom Conerly
I am trying to run one of the NPB2.4 benchmarks over two nodes. On each node I can run the benchmark on just that node, but when I try to run it across the two I get an error "bash: orted: command not found". The openmpi bin directory is in the PATH on both nodes. I can type "orted" in and I don't

[OMPI users] Process termination problem

2007-08-16 Thread Daniel SpÄngberg
Dear Open-MPI user list members, I am currently having a user with an application where one of the MPI-processes die, but the openmpi-system does not kill the rest of the application. Since the mpirun man page states the following I would expect it to take care of killing the application

Re: [OMPI users] Possible Memcpy bug in MPI_Comm_split

2007-08-16 Thread George Bosilca
Well, finally someone discovered it :) I know about this problem for quite a while now, it pop up during our own valgrind test of the collective module in Open MPI. However, it never create any problems in the applications, at least not as far as I know. That's why I'm reticent to replace t

[OMPI users] Possible Memcpy bug in MPI_Comm_split

2007-08-16 Thread Allen Barnett
Hi: I was running my OpenMPI 1.2.3 application under Valgrind and I observed this error message: ==14322== Source and destination overlap in memcpy(0x41F5BD0, 0x41F5BD8, 16) ==14322==at 0x49070AD: memcpy (mc_replace_strmem.c:116) ==14322==by 0x4A45CF4: ompi_ddt_copy_content_same_ddt (in /h

Re: [OMPI users] mpirun hangs

2007-08-16 Thread Jeff Squyres
On Aug 16, 2007, at 5:34 AM, jody wrote: Just a quick update about my ssh/LD_LIBRARY_PATH problem. Apparently on my System the sshd was configured not to permit user defined environment variables (security reasons?). To fix that i had to change the file /etc/ssh/sshd_config By changing the en

Re: [OMPI users] Unistall open-mpi

2007-08-16 Thread Jeff Squyres
"make uninstall" will wholly uninstall Open MPI from its installation tree. Additionally, if you installed Open MPI into a tree by itself, you can simply "rm -rf" the whole tree. You can always re-run "make install" to re-install it. On Aug 16, 2007, at 8:18 AM, Rodrigo Faccioli wrote:

[OMPI users] Unistall open-mpi

2007-08-16 Thread Rodrigo Faccioli
Hi, I need to do a test. My boss asked me if possible on my pc I run only mpich. Because of this I need uninstall open-mpi. I read configure file on openmpi-1.2.3 directory, but I did't nothing. So, How can I uninstall openmpi? After this can I install again? Thanks.

Re: [OMPI users] mpirun hangs

2007-08-16 Thread jody
Hi Tim Just a quick update about my ssh/LD_LIBRARY_PATH problem. Apparently on my System the sshd was configured not to permit user defined environment variables (security reasons?). To fix that i had to change the file /etc/ssh/sshd_config By changing the entry #PermitUserEnvironment no to

Re: [OMPI users] openMPI on openBSD, anyone?

2007-08-16 Thread Sven Stork
On Wednesday 15 August 2007 18:13, Hor Meng Yoong wrote: > Hi: > > I want to use a MPI-like solution on openBSD i386 PCs to communicate to a > central server running Solaris OS. I am wondering has anyone use openMPI on > openBSD. If so, which version? What kind porting issues encountered? There