Re: [OMPI users] debugging my program in openmpi

2007-05-10 Thread Jeff Squyres
Check out the FAQ: http://www.lam-mpi.org/faq/category6.php3 On May 10, 2007, at 9:50 PM, Code Master wrote: On 5/11/07, Tim Prins wrote: On Thursday 10 May 2007 07:19 pm, Code Master wrote: > I am a newbie in openmpi. I have just compiled a program with -g -pg (an > mpi program with

Re: [OMPI users] debugging my program in openmpi

2007-05-10 Thread Code Master
On 5/11/07, Tim Prins wrote: On Thursday 10 May 2007 07:19 pm, Code Master wrote: > I am a newbie in openmpi. I have just compiled a program with -g -pg (an > mpi program with a listener thread, which all MPI calls except > initialization and MPI_Finalize are placed within) and I run it. How

Re: [OMPI users] debugging my program in openmpi

2007-05-10 Thread Tim Prins
On Thursday 10 May 2007 07:19 pm, Code Master wrote: > I am a newbie in openmpi. I have just compiled a program with -g -pg (an > mpi program with a listener thread, which all MPI calls except > initialization and MPI_Finalize are placed within) and I run it. However > it crashes and I can't fin

[OMPI users] debugging my program in openmpi

2007-05-10 Thread Code Master
I am a newbie in openmpi. I have just compiled a program with -g -pg (an mpi program with a listener thread, which all MPI calls except initialization and MPI_Finalize are placed within) and I run it. However it crashes and I can't find any core dump, even I set the core dump max size to 10

Re: [OMPI users] Newbie question. Please help.

2007-05-10 Thread Jeff Squyres
Good to know. This suggests that building VASP properly with Open MPI should work properly; perhaps there's some secret sauce in the Makefile somewhere...? Off list, someone cited the following to me: - Also VASP has a forum for things like this too. http://cms.mpi.univie.ac.at/vasp-for

Re: [OMPI users] newbie question

2007-05-10 Thread Steve Wise
On Thu, 2007-05-10 at 20:07 -0400, Jeff Squyres wrote: > Brian -- > > Didn't you add something to fix exactly this problem recently? I > have a dim recollection of seeing a commit go by about this...? > > (I advised Steve in IM to use --disable-ipv6 in the meantime) > Yes, disabling it worke

Re: [OMPI users] newbie question

2007-05-10 Thread Jeff Squyres
Brian -- Didn't you add something to fix exactly this problem recently? I have a dim recollection of seeing a commit go by about this...? (I advised Steve in IM to use --disable-ipv6 in the meantime) On May 10, 2007, at 1:25 PM, Steve Wise wrote: I'm trying to run a job specifically over

Re: [OMPI users] OpenMPI 1.2.1: cannot install on IBM SP4

2007-05-10 Thread Tim Prins
On Thursday 10 May 2007 11:35 am, Laurent Nguyen wrote: > Hi Tim, > > Ok, I thank you for all theses precisions. I also add "static int > pls_poe_cancel_operation(void)" similary to you, and I can continue the > compilation. But, I had another problem. In ompi/mpi/cxx/mpicxx.cc, > three variables a

[OMPI users] newbie question

2007-05-10 Thread Steve Wise
I'm trying to run a job specifically over tcp and the eth1 interface. It seems to be barfing on trying to listen via ipv6. I don't want ipv6. How can I disable it? Here's my mpirun line: [root@vic12-10g ~]# mpirun --n 2 --host vic12,vic20 --mca btl self,tcp -mca btl_tcp_if_include eth1 /root/IM

Re: [OMPI users] OpenMPI 1.2.1: cannot install on IBM SP4

2007-05-10 Thread Laurent Nguyen
Hi Tim, Ok, I thank you for all theses precisions. I also add "static int pls_poe_cancel_operation(void)" similary to you, and I can continue the compilation. But, I had another problem. In ompi/mpi/cxx/mpicxx.cc, three variables are already defined. The preprocessor set them to the constant

Re: [OMPI users] OpenMPI 1.2.1: cannot install on IBM SP4

2007-05-10 Thread Tim Prins
Hi Laurent, Unfortunately, as far as I know, none of the current Open MPI developers has access to a system with POE, so the POE process launcher has fallen into disrepair. Attached is a patch that should allow you to compile (however, you may also need to add #include to pls_poe_module.c).

Re: [OMPI users] Newbie question. Please help.

2007-05-10 Thread Terry Frankcombe
I have previously been running parallel VASP happily with an old, prerelease version of OpenMPI: [terry@nocona Vasp.4.6-OpenMPI]$ head /home/terry/Install_trees/OpenMPI-1.0rc6/config.log This file contains any messages produced by compilers while running configure, to aid debugging if configure

[OMPI users] OpenMPI 1.2.1: cannot install on IBM SP4

2007-05-10 Thread Laurent Nguyen
Hello, I tried to install OpenMPI 1.2 but I saw there some problems when compiling files with POE. When OpenMPI 1.2.1 was released, I saw in the bug fixes that this problem was fixed. Then I tried, but it still doesn't work. The problem comes from orte/mca/pls/poe/pls_poe_module.c. A static f